Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03550 ATGCCCCCAGCCGCCGGAGCCGTCGCGTTACACTCTTCCCTTTGCTCCACCCCTTCTGAGAAACCGTACTCTTCTCTAAGATCAAACATTCTTCTTGTGGCACCCAAACCCAAAAGCCTCCTCCAAAACCACCCACTTTATCCCCCAACCCACGCCAAACTCTCCCTTGAATTCAAAGAGAAAATTCTCTGCCTTGAGGTAATGGGTATTGATGCAGGCAAAGCAATCTGCCAAAACCCTGATCTCCGTACAGCCACCATGGAATCCATTCAATCCATCATCACCTTCCTTTTCTCCAATGGCATTCTAGAAAAGGACCTGCCCAGAATCTTTGGCATGTGCCCCAAGATTCTCACCGCTGACATCAAAACTGATCTCTCCCCAGTTTTTGATTTCATCTTGAATGAACTCAAAGTTCCCGAACATAGCCTCAGGAGGGTGGTCAATAAGTGCCCAAGATTGCTTGCATCCAGTGTGAAAGATCAGCTTAGGCCAGCTTTGGTTTACCTAAGGAGACTTGGATTCAAGGATTTGGGGGCCTTGGCTTATCAAGATTCTGTTCTCTTGGTGTCTAATGTAGAGCACACCCTCATCCCTAAACTTAGATTTCTGGAGACTTTGGGACTTTCCAAGGATGAGATTAGGAGTATGGTGTTGAGATGTCCAGCACTGCTCACTTTCAGTATAGAAAATAATTTTCAGCCAAAGTATGACTATTTAACTGGAGAAATGGGGAGAAAATTGGAGGAGCTGAAAGAGTTTCCTCAGTACTTTGCTTTTAGTTTGGAGAACAGGATAAAACCTAGACACATGGAGGTTGTGCAGAGTGGGATCACTTTACCTTTGTCAGTGATGCTTAAAAGCAATGATGAAGAATTTAGGGAGTTGTTAAAGCAGGGGGGTGGTTGA 909 0.4521 MPPAAGAVALHSSLCSTPSEKPYSSLRSNILLVAPKPKSLLQNHPLYPPTHAKLSLEFKEKILCLEVMGIDAGKAICQNPDLRTATMESIQSIITFLFSNGILEKDLPRIFGMCPKILTADIKTDLSPVFDFILNELKVPEHSLRRVVNKCPRLLASSVKDQLRPALVYLRRLGFKDLGALAYQDSVLLVSNVEHTLIPKLRFLETLGLSKDEIRSMVLRCPALLTFSIENNFQPKYDYLTGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGITLPLSVMLKSNDEEFRELLKQGGG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03550 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 FunFam Transcription termination factor MTEF1, chloroplastic 133 300 - -
Phac9g03550 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 Pfam mTERF 65 176 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 PANTHER CGI-12 PROTEIN-RELATED 44 295 IPR003690 GO:0003690|GO:0006355
Phac9g03550 302 Gene3D Transcription termination factor 3, mitochondrial 73 299 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03550 Phac-Chr9 34720490 34722674 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac9g03550 mTERF 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03550 K15032 - gmx:100788221 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g03550 9 34720490 34722674 Phac9g03550 9 34720490 34722674 ECH