Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03549 ATGACGTCACGGTCGGGTCAAGGCAGCAGCGGGAGCAGTAGGACCCGTGTGGGGAAGTACGAGTTGGGTCGGACCCTGGGCGAGGGTAATTTCGCCAAGGTAAAGTTCGCTAGGCACGTGGAAAGCGGAGAGAACGTCGCTATCAAGATTCTCGACAAGGAGAAACTTCTCAAGCACAAGATGATTGACCAGATAAAACGAGAAATATCAACAATGAAACTTATTAGACACCCAAATGTCATACGTATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTCGTGACTGGTGGAGAGTTGTTTGATAAAATTGCACGCAGCGGGAGGTTGAAAGAAGATGGAGCAAGAAAATATTTTCAACAGCTTATATGTGCTGTGGATTACTGCCATAGTAGAGGTGTTTTTCATAGAGACCTAAAGCCTGAGAATTTATTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCAGAGGTGATTCACAACAAAGGTTATGATGGTGCAAAGGCAGATCTATGGTCATGTGGTGTTATTCTCTTTGTTTTAATGGCAGGCTATCTGCCCTTTGAAGAAACCAATCTAACGGCTTTATATAAAAAGATTTACAAGGCTGAGTTCACGAGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAACAGAATACTTGATCCAAATCCTGCCACTAGGATTACAATTGCTGAGGTCGTTGAGAATGATTGGTTCAAGAAGGGATATAAGCCTCCCGTATTTGAACAGGCTAGTGTTAGTCTTGATGATGTAAATTCTATTTTCAGCGAATCTATGGATTCGCAAAATCTTGTAGTTGAGAGGCGTGAAGAGGGGCATGCAGCACCAGTGACAATGAATGCCTTTGAGCTTATATCTAAATCTCAAGGTCTCAACCTTAGTAGTCTATTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACACGATTCACGTCCAAATGTTCAGCAGATGAAATAATTTCAAAAATTGAGGAAGCTGCGGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAGCCACTGAGATCTTAGAGGTAGCCCCTTCGCTATACATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATCTTGCTACTGGGCTGAAAGATATTGTTTGGAAAGCTGAGCCTATCGATGAAGGAAAAGGTGATTAG 1359 0.4224 MTSRSGQGSSGSSRTRVGKYELGRTLGEGNFAKVKFARHVESGENVAIKILDKEKLLKHKMIDQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDGARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLTALYKKIYKAEFTSPPWFSSSAKKLINRILDPNPATRITIAEVVENDWFKKGYKPPVFEQASVSLDDVNSIFSESMDSQNLVVERREEGHAAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISKIEEAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLATGLKDIVWKAEPIDEGKGD* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03549 452 CDD STKc_SnRK3 19 274 - -
Phac9g03549 452 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03549 452 SUPERFAMILY Protein kinase-like (PK-like) 17 303 IPR011009 -
Phac9g03549 452 FunFam Non-specific serine/threonine protein kinase 316 442 - -
Phac9g03549 452 CDD CIPK_C 323 438 - -
Phac9g03549 452 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03549 452 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Phac9g03549 452 Gene3D Kinase associated domain 1, KA1 317 442 - -
Phac9g03549 452 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Phac9g03549 452 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03549 452 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Phac9g03549 452 Pfam NAF domain 319 379 IPR004041 GO:0007165
Phac9g03549 452 FunFam Non-specific serine/threonine protein kinase 13 316 - -
Phac9g03549 452 Gene3D Phosphorylase Kinase; domain 1 9 99 - -
Phac9g03549 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Phac9g03549 452 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 427 - -
Phac9g03549 452 Gene3D Transferase(Phosphotransferase) domain 1 100 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03549 Phac-Chr9 34708758 34717527 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03549 3 448 CBL-interacting serine-threonine protein kinases AT1G01140 68.142 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac9g03549 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03549 - - gmx:100788746 833.558