Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03510 ATGTGTGTGCAGGATGCAGAGAAAGATAAGGATAAAACCTCAACAAATTCATGGCCTTTGCATTGTCACCTTTTGCTCGCCTCCCACATGGACAAAACAAGATCTTTTTTCACAACTTCAACTAATGGCACCACTAATATCACTGTTCAAACTTCTATTCCTCTAGAAAGCATTTATGAGGACGCGGTGATTGCAGACAAGAAACAGAATCAGATGATTTTGGCCCCGGCTCTTCGGTCTGGAGAGTGGTCTGACATAGGAGAACGCCCTTACATGGAGGACACTCACATATGCATTGGAGACTTGGCAAAGAAATTTAATTATAATGCACTTTCTGGGGAAGCTGTTTCCTTTTATGGAGTATTTGATGGACATGGAGGGAAGAGTGCTGCACAATTTGTACGTGATAATCTGCCAAGATTTATTGTTGAGGATGTTAACTTTCCTTTGGAGCTTGAGAAGGTGGTCAAAAGGTCATTTTTGGAGGCTGATGCTGCATTTCTAAAATCATCCGCTCAAGAGCCTTCACTTTCTTCTGGTACAACTGCTTTAACTGCAATTATATTTGGAAGGTCTTTACTTGTAGCTAATGTGGGAGACTGCCGAGCTGTCTTGTCCCGCCATGGAAGAGCCATAGAAATGTCTAAAGATCATAGGCCAAACTGTGTCAATGAAAGGACACGGGTTGAGTCCCTAGGTGGCTTCATTGACGATGGTTACCTGAATGGCCAGTTAGGTATCACTCGCGCTATTGGAGATTGGCACCTTGAAGGAATGAAGGAAACGAGTGAAAGAGGAGGACCACTGAGTGCTGAACCTGAACTTAAATTGATCACATTGACCAAAGAAGATGAATTCTTGATAATTGCTAGTGATGGAATATGGGATGTTTTTAGTAGCCAAAATGCTGTGGATTTTGCTAGGAGAAGGCTTCAAGAGCACAACGATGAGAAACTATGCTGCAAGGAAATAGTGCAGGAAGCAATCAAGAGAGAATCAACTGATAACTTGACAGTTGTGATGGTATGTTTTAACTCAGATCCTCCAACACCTGTGGTTGTGGAAAGAACACGAGTAAGAAGAAGCATATCTGCAGAAGGACTTCAGAATCTTAAATGCCTGCTAAAAGAATAA 1134 0.4206 MCVQDAEKDKDKTSTNSWPLHCHLLLASHMDKTRSFFTTSTNGTTNITVQTSIPLESIYEDAVIADKKQNQMILAPALRSGEWSDIGERPYMEDTHICIGDLAKKFNYNALSGEAVSFYGVFDGHGGKSAAQFVRDNLPRFIVEDVNFPLELEKVVKRSFLEADAAFLKSSAQEPSLSSGTTALTAIIFGRSLLVANVGDCRAVLSRHGRAIEMSKDHRPNCVNERTRVESLGGFIDDGYLNGQLGITRAIGDWHLEGMKETSERGGPLSAEPELKLITLTKEDEFLIIASDGIWDVFSSQNAVDFARRRLQEHNDEKLCCKEIVQEAIKRESTDNLTVVMVCFNSDPPTPVVVERTRVRRSISAEGLQNLKCLLKE* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03510 377 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Phac9g03510 377 Pfam Protein phosphatase 2C 91 336 IPR001932 -
Phac9g03510 377 FunFam Probable protein phosphatase 2C 22 63 347 - -
Phac9g03510 377 CDD PP2Cc 79 344 IPR001932 -
Phac9g03510 377 SMART PP2C_4 69 342 IPR001932 -
Phac9g03510 377 Gene3D - 61 348 IPR036457 -
Phac9g03510 377 ProSiteProfiles PPM-type phosphatase domain profile. 79 344 IPR001932 -
Phac9g03510 377 SUPERFAMILY PP2C-like 73 346 IPR036457 -
Phac9g03510 377 PANTHER PROTEIN PHOSPHATASE 2C 66 342 IPR015655 GO:0004722|GO:0006470
Phac9g03510 377 SMART PP2C_SIG_2 94 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03510 Phac-Chr9 34304563 34308197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03510 68 375 PP2C-type Phosphatase Gene Family AT2G25620 57.097 1.55e-128 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Phac9g03510 PP2C 3.4e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03510 K14803 - gmx:100813157 637.876