LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac9g03505	ATGGCATTTGAGCAAACCTCTGTTCCTGGCGGCGATGTTGTGAGGCCACTGAATTCAGTAGCCCGGAGTGTGGCGGAGGAGTCTCTCGTTTTGCCGGTGTCTACGGCGGTTCCCGGCGCGGTGCCGATTTTCTACCCTGCGTCTGTCTCTGATGCTGGCTTGGTTGGAATGGGGTATGGGAATGTGACTTCGGGAGGTGGCGGTGGGGCTGCCACGTGGTGTGTTCGCCCTGCTGTGCCTATTCATAATCATAATCCCTCCGTGAATCCTGCTGTTGGGTTTGTTCATGCTCCTAGTTTTCCCAATAGGGTTGGTGCTGTTGGTGGCAATGCTGTTGATGTTTCGAGTAGTTTTGTGGCTGCTACTCATGGGTATCCTATGAATTTGGGGGGTAACTGGGTTGGCTCGGGTAATGGTCTGGATAATATTAATAGTAGTGATGTTAATAATAATAATAATAATAATGCTGTTCCGGCGAACAGCAGAGTCATTAGCAATTCTGGTGATCATGTTTGTGGTGGTGTTGGGGTTGGTTCCATTTCCAATATCCCCTCAAGCCAGCGGACAGATCAGGCGAGTGAGGAGGGTGGGGATGATTCGGTTTCAGGGCGGAAAATGAAGTTGATGTGCAGTTATGGTGGGAAGATTTTGCCTAGGCCAAGTGATGGGATGTTGAGATATGTTGGAGGGCATACAAGGATCATAAGTGTTAAGAGAGATGTGAGTTTTAATGATTTGGTGCAGAAGATGGTTGGTACATTTGGGCAACATGTGGTTATCAAATATCAGCTCCCTGATGAGGATCTTGATGCATTGGTTTCGGTTTCCTGCCCTGATGATCTGGAGAATATGATGGAGGAGTATGAGAGATTGATTGAGAGGTCTCCTAACGGTTCTCCCAAATTAAGGGTCTTTCTTCTTTCTGCTTCAGAACTTGATCCTTCAGGTGTAGCACAGTTTGTAAATTTGCATGATGGTGGACTGAAATATGTTGAAGCTGTGAATGGAATTACTGATGGGATTGGTGGCAAACTAACAAGGAAAGCGAGTTATACAAGTGCCGTATCTACCCAGAATTCTGATTTTAGCGGGATAGATGCTCTTGATAGCTTGAATGCTGCTCAAGGGGATGTCACTGGGGTACCTGTACCTATGCCCAGTTCTTTATCACCTGAGGGGAACGTGGCCTCTTCTCATGATGGTACTTCAAATTCTGTGGTTCCTGAGCCTGGTACATCTTACACAGAGGCCTCTGCGCTTCCACTGGGCATTCCTGTCAGTAATTCTGGTCCAACCCACACTCCACTTCTCCAGAATGAGGTTGAGTTAGAAAAGTCTGTTCCTGTTACTTTTTCTCAACCTCAATTTGGGGTGCAACAATCTGGTTTGGAAATTCCACCCTCTGCACCTTTGCAAACTTTTGTTGATCATCGTCAGGAGATTATGAATCATGCAGATTTTGTCCAGCTTCCTCCCCATGTGGGATTCCTGAATCCTCAGCTTCTAGGTAAGCCTGGCTCCATCTACTCCCAACATCAATTTCATGATAATACTTCCTGTTTTGGGTCCCATCAGGTAATCCCTGCAGTGCAAATGACCATGACTCAGCCATTTTCTCTTGCTGGTTTAAGACCAAGTGTTATTCAATCACAACCATTCATGCAACCTCAGCAAAACCATTTGGACCAATATAATGATGAAAATGCTACAGGGCTAAGGATTCACCAGGTTCCTGCTGAACAAAGTTACAAAACATTTCAGGTTCAAGTCCCTTTTGGAGGTAATTATGGCTGGATACAGGTTCCTTCAGCAGAGCATGTAATCTTTTCTGATGCATTTGTACCTCAACAACCAATGATGACCCCTGAGAAATTCCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAGTTGCCTCATGCACATTCAGATCCTGTGGTTAAGGATCAGAAAAATAGCTGTGCTTGTCCAATTTCTGATTCAATCCCAAGTTTCTACAGTCTACCTACGGAGGAAAATTCAAGGGCTCAAGCAACAAATATTGTTTTGGTATCTGCACCAATGAAGGAAGACAATGTTGAACAAGCAGTTGTGACCAGACCCAAGGTCCTAAGCAAATTGGATACTCCACCTGGAGTAGCTTGTACTGACACAACTGGACTTTCTTTGGAGTCTGAAGGTGAGAGGGCTTTTATACAAAAGCTGGACAGGTCGGATCATCCCAGGAATGCAGTTATCCAGGAAGCAGTTGTAAGAATAGGAGAAAAACAGTTGCCAAGTGATGGGCTGATGGGAACAGCACCACTTTCTTATCGAGATGATGTCACCCGCCAGCATATGGTGCCACTTGAAAACAGGTCTAAAGAGGATGCTCCTGTGAATAAACCTGTTAATAATGATATACCTTTAGTTGTTGGCACATCTATTGAAAATTCTGACTGTATGGTTCAAGAATGTCCAACAGAATATACAAATGAACTTGCTAGCACTATTTCAAAAGCAGATGCCATGGAGAATTGGATAGCACAGGATCTTCTCAAACCTATTGATGGAAGAATGGACAACCTGAAAATAGGTAATCCTGAAAATTTTCTAAATAATGATAAATTTGATTACAGCAGCACTCAACATATTGTAGAGAAGAAAGGGTTGGCTCTAGATAACAACCTTGGGAAGTCAAAGTTGATCACTGATGCAGATCAAATTAATATGATAGATATGCTTCCTAGTTCTACTGTGGAAATTTCATATGGGAATAATTCCAGGCCAGTGGAATGTAATGAGGTTCTACAACCCCCTATTTGGGGTATACCTGGCTCAAATCCTCAGTCAAAGAGTGGAAACCATAACAGGGATGATGCAGTTTTATCTTCAGTTCCTCCATCTTCTAGGTTTGGAGATGTGCAGGATTCCTCAAATTCACTTTTTAGCAATCAGGATCTATGGAATATACACAGTTCATACTTTCCACCACCGAGACCTAACAAAGTTGCATTGAAGAAAGAAACCTATTCAAATAAAGATCAACTTGGTGAGAATCCGGGCATCAATGGGGAACAAAATTTAGAAGCTCAAATAGACAATGGCCTCTATCAGACATTCAAACAGAATTTAGCTTTGGAAGAAGCTCGATCTGCCACCAAGGTCTCATCAGAAGACCGACAACTTCAAGCCATTGCTGAAGGTTTAGCTGCTTCCGTTCTGCACTCAAGCACTTCTTCAAATATTGATTTGAATGCCAGAGATTTGTCCCATCATGAGGACATTGGCGACGGAGATGTTCGAAATAATCAAATAGATATACAGCATAAAGATAAAATTCAGGATCTCAAAAGCAAGCTTCCGGAGAAATCAAATTTTGGCTTTCCAGCATCAGATGTTGGAGCTTTGCAGGTTATAAAAAATTGTGACCTTGAAGAGCTGATAGAGTTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGCACTGATGTTGCAATAAAGCGGATTAATGATAGGTGTTTTGCAGGAAAACCTTCGGAGCAAGAGCGCCTGAGAGCAGACTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCAAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCGGGAGGTTCTGTGGCGACAGTGACGGAGTATATGGTTAATGGTTCTCTAAGAAATGCATTGCAGAAGAATGGCAGGAATCTTGACAAGCGCAAACGGCTTTTGATTGCGATGGATGTGGCCTTTGGCATGGAGTACTTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGTGACAACTTGCTCGTGAATCTCCGAGATCCACACCGTCCAATATGCAAGGTTGAAATATTTTATTCTTATGTGGTCATATTTGAAATATTGTTGTTCTGTACTCATTCATACTAG	3924	0.4322	MAFEQTSVPGGDVVRPLNSVARSVAEESLVLPVSTAVPGAVPIFYPASVSDAGLVGMGYGNVTSGGGGGAATWCVRPAVPIHNHNPSVNPAVGFVHAPSFPNRVGAVGGNAVDVSSSFVAATHGYPMNLGGNWVGSGNGLDNINSSDVNNNNNNNAVPANSRVISNSGDHVCGGVGVGSISNIPSSQRTDQASEEGGDDSVSGRKMKLMCSYGGKILPRPSDGMLRYVGGHTRIISVKRDVSFNDLVQKMVGTFGQHVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLIERSPNGSPKLRVFLLSASELDPSGVAQFVNLHDGGLKYVEAVNGITDGIGGKLTRKASYTSAVSTQNSDFSGIDALDSLNAAQGDVTGVPVPMPSSLSPEGNVASSHDGTSNSVVPEPGTSYTEASALPLGIPVSNSGPTHTPLLQNEVELEKSVPVTFSQPQFGVQQSGLEIPPSAPLQTFVDHRQEIMNHADFVQLPPHVGFLNPQLLGKPGSIYSQHQFHDNTSCFGSHQVIPAVQMTMTQPFSLAGLRPSVIQSQPFMQPQQNHLDQYNDENATGLRIHQVPAEQSYKTFQVQVPFGGNYGWIQVPSAEHVIFSDAFVPQQPMMTPEKFQRVEDCYMCQKKLPHAHSDPVVKDQKNSCACPISDSIPSFYSLPTEENSRAQATNIVLVSAPMKEDNVEQAVVTRPKVLSKLDTPPGVACTDTTGLSLESEGERAFIQKLDRSDHPRNAVIQEAVVRIGEKQLPSDGLMGTAPLSYRDDVTRQHMVPLENRSKEDAPVNKPVNNDIPLVVGTSIENSDCMVQECPTEYTNELASTISKADAMENWIAQDLLKPIDGRMDNLKIGNPENFLNNDKFDYSSTQHIVEKKGLALDNNLGKSKLITDADQINMIDMLPSSTVEISYGNNSRPVECNEVLQPPIWGIPGSNPQSKSGNHNRDDAVLSSVPPSSRFGDVQDSSNSLFSNQDLWNIHSSYFPPPRPNKVALKKETYSNKDQLGENPGINGEQNLEAQIDNGLYQTFKQNLALEEARSATKVSSEDRQLQAIAEGLAASVLHSSTSSNIDLNARDLSHHEDIGDGDVRNNQIDIQHKDKIQDLKSKLPEKSNFGFPASDVGALQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVEIFYSYVVIFEILLFCTHSY*	1308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac9g03505	1307	Gene3D	Transferase(Phosphotransferase) domain 1	1225	1289	-	-
	Phac9g03505	1307	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	225	309	-	-
	Phac9g03505	1307	SUPERFAMILY	CAD & PB1 domains	221	311	-	-
	Phac9g03505	1307	Pfam	PB1 domain	225	305	IPR000270	GO:0005515
	Phac9g03505	1307	ProSitePatterns	Protein kinases ATP-binding region signature.	1144	1175	IPR017441	GO:0005524
	Phac9g03505	1307	CDD	PB1_UP2	209	306	-	-
	Phac9g03505	1307	MobiDBLite	consensus disorder prediction	390	411	-	-
	Phac9g03505	1307	PANTHER	OS05G0427100 PROTEIN-RELATED	199	575	-	-
	Phac9g03505	1307	Gene3D	Phosphorylase Kinase; domain 1	1131	1224	-	-
	Phac9g03505	1307	SMART	PB1_new	220	307	IPR000270	GO:0005515
	Phac9g03505	1307	SMART	serkin_6	1138	1307	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac9g03505	1307	ProSiteProfiles	Protein kinase domain profile.	1138	1307	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac9g03505	1307	Gene3D	-	226	309	-	-
	Phac9g03505	1307	SUPERFAMILY	Protein kinase-like (PK-like)	1132	1276	IPR011009	-
	Phac9g03505	1307	MobiDBLite	consensus disorder prediction	384	411	-	-
	Phac9g03505	1307	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	1263	1275	IPR008271	GO:0004672\|GO:0006468
	Phac9g03505	1307	MobiDBLite	consensus disorder prediction	182	204	-	-
	Phac9g03505	1307	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	1131	1225	-	-
	Phac9g03505	1307	Pfam	Protein tyrosine and serine/threonine kinase	1143	1277	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac9g03505	Phac-Chr9	34256999	34266012	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac9g03505	204	680	MAP Kinase Kinase Kinase	AT3G46920	39.876	2.35e-84	298

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-6	Phac9g03505		PK_Tyr_Ser-Thr	3.9e-28	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac9g03505	-		-	gmx:100776264	2056.95