Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03489 ATGGAGATTTTCAACTGCTTCTACATCAATCTTCTTGCTACCTTCATGTTATCAGCAGTTCTAGCAATCGACCCCTACTCAGAAGCACTCCTCAGCCTAAAACATGAACTTCTAGATGATGATAACAGCTTGCGCAACTGGGTGGTACCCTCAGGAGAAAAATTAACTGGGAAATACTATGCTTGTTCTTGGTCAGGTGTCAAGTGTAACAATGACTCAACCACTGTGACTTCTATAGATCTTTCCATGAAGAAACTGGGAGGTGTATTGTCAGGGAAGCAATTCAGCATCTTCACAAACCTCACTAATCTCAACCTTAGCTATAATTTCTTCTCAGGACAGCTTCCAGCAGAGATTTTCAACCTCTCCAGCCTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTTCCTTCCCCGGTGGAATTACTAGGCTCCAAAATTTGGTTGTACTTGATGCCTTTAGCAACAGTTTTTCAGGGTCGTTGCCTGCTGAATTTTCACAGCTAGCAAACCTTAAAGTTCTCAATCTAGCTGGGAGCTACTTCAGAAATTCAATTCCATCTGAATATGGTTCTTTTAAAAGCCTTCAGTTTCTTCATCTTGCTGGAAACTCTCTTTCAGGAAGTATACCTCCAGAACTGGGTAACCTCAAAACAGTGACCCATATGGAGATTGGGTACAACCTATACCAGAGTTTTATACCACCCGAACTAGGTAACATGAGTCAGCTTCAGTATCTTGACATAGCAGGAGCAAATCTATCAGGTCATATACCAAAGCAACTCTCCAACCTCACCAGTTTGCAATCACTTTTCCTGTTCAGGAACCAGCTCACAGGAACAGTGCCAAGTGAGCTCAGTAACATTCAATCCCTGGCAGATTTAGATCTCTCTGATAACTTCCTCTCAGGGTCCATTCCCGAAAGCTTCTCAGCCCTGGAGAACCTAAGACTACTCAGTCTCATGTACAATGACATGAGTGGCACTGTTCCTGAAGGAATTGCGCAACTCCCATCCTTGGAAACTCTTCTCATTTGGAACAACCGCTTCTCTGGGTCACTTCCACAGAGCTTAGGGAGGAACTCCAAACTCAAGTGGGTGGATGCTTCCACAAACAATTTAGTTGGCAGCATACCACCAGATATCTGTGTGAGTGGAGTACTATTTAAGCTAATACTGTTTTCAAACAACTTCACTGGTCATCTCTCATCAATCTCCAATTGTTCTTCACTTGTTCGCCTTCGCCTAGAAGATAATTCATTTTCAGGAGAAATCACTTTGAAATTCACCCATCTTCCTCATATCTTATACGTCGATCTCTCCAGGAACAACTTTGTTGGTGGCATTCCCTCAGATATTTCTCAAGCCACTGAACTAGAGTATTTTAATGTCTCTTATAATCCGCAATTAGGAGGTACCATCCCTACACAAACATGGTCTTTGCCCCAACTTCAAAATTTTTCAGCATCTTCTTGTGCTATATATGGTGGTCTTCCCCTATTTGAGTCCTGCAAATCAATTTCAGTTATTGATCTAGATAGCAATAACTTATCTGGAATCATCCCAAACAGTGCTTCCAAATGTCGAGTTCTTGAGAGAATCAACCTATCCAACAATAACTTAACAGGTCATATACCTGAAGAGCTTGCAAGTATTCCGGTTCTTGTTGTGGTGGACCTATCAAACAACAAGTTCAATGGCCTCATACCTGCTGAGTTTGGTAGTTGTTCAAGTTTACAACTTCTGAATGTGTCTTTTAACAATATCTCTGGTTCAATACCCACAGGAAAGACATTCAAATTGATGGGAGAAAGTGCATTTATCGGAAATTCAGAGCTATGTGGAGCACCCCTGAGATCATGTCCTGATTCAGTTGGAATATTGGGCAGAAAAGGCACGTGGAAGATTACACATATTGTGCTACTCTCTGTAGGGTTGCTGATAGTTCTTCTAGGACTTACTTTTGGAATATTTTATTTGAGAAGGGGGATAAAAAGTCAATGGAAGATGGTCTCATACGTTGGTCTCCCTCAATTCACAGCAAATGATGTTTTGACGAGCCTCACTGCTACAAAACCAACAGAAGTTACATCACCATCACCAGCAGTTGCAAAGGCTGTTCTGCCTACAGGAATAACAGTTTTGGTCAAGAAGACAGAATGGGAAGCTAGGAGCATCAAGGTTGTGTCAGAATTTATAATGAGACTGGGAAATTCAAGGCACAAGAATTTAATCAGATTACTGGGGTTTTGCCACAACCAGCATTTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAAAATGAAAATGAAATGGGATTGGTCAGCAAAATTCAGAACAGTGGTTGGAATAGCAAGGGGACTATGCTTTCTTCACCATGAATGTTACCCAGCAATACCCCACGGAGACTTGAAGCCTAGCAATGTTGTATTTGACGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACAGGTTTTGAGGTTGAGCAAAGATTCATCACCCACCATAACTAAGTGGGAAGCAGAATACGATGAGGCCACAAAAGAAGAACTGCGCATGGATATCTACAATTTTGGGGAGATGATTCTAGAAATTTTAAGTGGCGGAAGGTTGACAAATGCAGGAGCCAGCATACACAGCACACCATGGGAGGATCTCTTGAGAGAAATTTATAATGAGAATGAAGCAAGCTCCGCAAGTTCATTGCATGAGATTAAACTGGTTCTTGAGGTTGCTATGTTTTGCACCAGAAGCAGGTCATCGGATCAGCCATCAATGGAAGATGTTCTCAAGCATCTGTCAGGGCTAAAGCATATAGATGATGGCAGAACTTCGAAAGAAGGGCAATAA 2874 0.4175 MEIFNCFYINLLATFMLSAVLAIDPYSEALLSLKHELLDDDNSLRNWVVPSGEKLTGKYYACSWSGVKCNNDSTTVTSIDLSMKKLGGVLSGKQFSIFTNLTNLNLSYNFFSGQLPAEIFNLSSLTSLDISRNNFSGSFPGGITRLQNLVVLDAFSNSFSGSLPAEFSQLANLKVLNLAGSYFRNSIPSEYGSFKSLQFLHLAGNSLSGSIPPELGNLKTVTHMEIGYNLYQSFIPPELGNMSQLQYLDIAGANLSGHIPKQLSNLTSLQSLFLFRNQLTGTVPSELSNIQSLADLDLSDNFLSGSIPESFSALENLRLLSLMYNDMSGTVPEGIAQLPSLETLLIWNNRFSGSLPQSLGRNSKLKWVDASTNNLVGSIPPDICVSGVLFKLILFSNNFTGHLSSISNCSSLVRLRLEDNSFSGEITLKFTHLPHILYVDLSRNNFVGGIPSDISQATELEYFNVSYNPQLGGTIPTQTWSLPQLQNFSASSCAIYGGLPLFESCKSISVIDLDSNNLSGIIPNSASKCRVLERINLSNNNLTGHIPEELASIPVLVVVDLSNNKFNGLIPAEFGSCSSLQLLNVSFNNISGSIPTGKTFKLMGESAFIGNSELCGAPLRSCPDSVGILGRKGTWKITHIVLLSVGLLIVLLGLTFGIFYLRRGIKSQWKMVSYVGLPQFTANDVLTSLTATKPTEVTSPSPAVAKAVLPTGITVLVKKTEWEARSIKVVSEFIMRLGNSRHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEKMKMKWDWSAKFRTVVGIARGLCFLHHECYPAIPHGDLKPSNVVFDENMEPHLAEFGFKQVLRLSKDSSPTITKWEAEYDEATKEELRMDIYNFGEMILEILSGGRLTNAGASIHSTPWEDLLREIYNENEASSASSLHEIKLVLEVAMFCTRSRSSDQPSMEDVLKHLSGLKHIDDGRTSKEGQ* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03489 957 Gene3D Ribonuclease Inhibitor 185 281 IPR032675 -
Phac9g03489 957 FunFam Leucine-rich repeat receptor-like protein kinase 26 187 - -
Phac9g03489 957 Gene3D Transferase(Phosphotransferase) domain 1 763 955 - -
Phac9g03489 957 Gene3D Ribonuclease Inhibitor 388 623 IPR032675 -
Phac9g03489 957 Gene3D Phosphorylase Kinase; domain 1 700 762 - -
Phac9g03489 957 SUPERFAMILY RNI-like 283 596 - -
Phac9g03489 957 Pfam Protein tyrosine and serine/threonine kinase 712 941 IPR001245 GO:0004672|GO:0006468
Phac9g03489 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 680 764 - -
Phac9g03489 957 SMART LRR_typ_2 433 457 IPR003591 -
Phac9g03489 957 SMART LRR_typ_2 266 290 IPR003591 -
Phac9g03489 957 SMART LRR_typ_2 553 576 IPR003591 -
Phac9g03489 957 SMART LRR_typ_2 98 122 IPR003591 -
Phac9g03489 957 SMART LRR_typ_2 194 218 IPR003591 -
Phac9g03489 957 SMART LRR_typ_2 338 362 IPR003591 -
Phac9g03489 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Phac9g03489 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 188 293 - -
Phac9g03489 957 SUPERFAMILY L domain-like 59 381 - -
Phac9g03489 957 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Phac9g03489 957 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Phac9g03489 957 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Phac9g03489 957 SUPERFAMILY Protein kinase-like (PK-like) 704 942 IPR011009 -
Phac9g03489 957 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Phac9g03489 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 765 949 - -
Phac9g03489 957 Gene3D Ribonuclease Inhibitor 282 386 IPR032675 -
Phac9g03489 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 311 624 - -
Phac9g03489 957 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Phac9g03489 957 PANTHER UNNAMED PRODUCT 162 879 - -
Phac9g03489 957 SMART serkin_6 704 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03489 957 ProSiteProfiles Protein kinase domain profile. 669 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03489 Phac-Chr9 34136009 34139792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03489 7 942 Receptor kinase-like Gene Family AT5G51350 54.277 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac9g03489 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03489 - - gmx:100782323 1626.3