Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03469 ATGGCCTCTGACATCTCGTTTGAGGACCTCAAGAAGGAGAATATTGATCTTGCAAAGATTCCTGTTGAAGAGGTCTTTGAGAAGCTAAAATGTAGCAGGCAGGGTCTAACATCCTCAGAAGGAGAGAAGAGGCTCCAGATTTTTGGCTACAACAAATTAGAAGAGAAAAATGAGTCCAAGCTCCTAAAGTTCTTGGGTTTCATGTGGAATCCTCTATCATGGGTTATGGAGTGTGCAGCTATCATGGCCATTGTATTGGCCAATGGAGGGGGCAAGCCACCGGATTGGCAAGATTTCACTGGTATTGTAGTGTTGCTTATCGTCAACTCAACCATCAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGCTGTTGTCTTTGCCACTGGTCTTAACACCTTCTTTGGCAAGGCTGCTCATCTTGTAGACAGCACCAACAATGTTGGTCACTTTCAACAGATCATTGAACTTTGTGGCCTTAAAGGAGAGACCCTGAAAAAGGCACACAAGGTTATTGATGAATATGCTGACCGCGGTCTGCGTTCCTTGGGTGTTGCTCGCCAGACTGTTTCAGAGAAGACCAAGGAGAGTGCTGGAGATCCATGGGAGTTTTTGGGTCTTCTACCTCTCTTTGATCCTCCAAGGCATGATAGTGCTGAGACCATTCGTCGTGCTCTTGAACTTGGAGTCAATGTCAAAATGATCACTGGTGACCAACTTGCCATTGGCAAAGAAACCGGTCGCAGACTTGGAATGGGCACCAACATGTACCCTTCATCCTCCCTCCTTGGTGATTCCTCAGATGGAGCCCTTTCTTCAATCTCAGTTGATGAACTCATTGAGAAGGCTGACGGATTTGCTGGAGTCTTCCCTGAGCACAAGTATGAGATTGTGAAGAGGTTGCAGGATAGAAAGCACATATGTGGAATGACTGGAGATGGTGTGAACGATGCACCAGCACTGAAGAAGGCAGACATTGGCATTGCAGTGGATGATGCAACTGACGCCGCAAGGAGTGCCTCTGATATTGTTTTGACCCAGCCTGGACTCAGTGTGATTGTGAGTGCTGTGTTGACAAGCAGGGCCATTTTCCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATCACAGTCCGTATAGTGTTTGGCTTCTTGCTTGTTGCTTTAATATGGAAGTTCGACTTCTCTCCCTTCATGGTTCTCATCATTGCCATCTTGAACGATGGAACGATCATGACCATATCAAAAGACAGGGTGAAGCCATCTCCTTTGCCTGATTCATGGAAACTCAACGAAATCTTTGCCACAGGAGTGGTTCTTGGAGCATACATGGCCATCATGACCGCAGTCTTCTTTTACCTTATTCACGACACAGATTTTTTCTCTAAAGTGTTTGGTGTGAGACCAATTGCAGAAAGTGAGGAGCAGCTTAACTCTGCTCTCTACCTTCAAGTGAGTATCATTAGTCAGGCACTGATCTTCGTGACCAGGTCAAGGGGCTGGTCATATTTTGAACGCCCTGGCACCATGCTCCTTGTTGCCTTCCTTTGTGCCCAACTGGTGGCCTCTGTGATTGCTGTGTATGCACATTGGGACTTTGCCAAAATCCATGGAGTTGGGTGGGAATGGGCTGGAGTAATATGGATCTACAGTATTATTACATACATCCCTCTTGACATCCTCAAATTTCTCATCCGCATTACAGGCATGGCTTCCCAAAACCAGGCTTAG 1773 0.4636 MASDISFEDLKKENIDLAKIPVEEVFEKLKCSRQGLTSSEGEKRLQIFGYNKLEEKNESKLLKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFTGIVVLLIVNSTISFIEENNAGNAAAALMAGLAPKTKAVVFATGLNTFFGKAAHLVDSTNNVGHFQQIIELCGLKGETLKKAHKVIDEYADRGLRSLGVARQTVSEKTKESAGDPWEFLGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDSSDGALSSISVDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTQPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITVRIVFGFLLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGAYMAIMTAVFFYLIHDTDFFSKVFGVRPIAESEEQLNSALYLQVSIISQALIFVTRSRGWSYFERPGTMLLVAFLCAQLVASVIAVYAHWDFAKIHGVGWEWAGVIWIYSIITYIPLDILKFLIRITGMASQNQA* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03469 590 SUPERFAMILY HAD-like 216 370 IPR036412 -
Phac9g03469 590 FunFam Plasma membrane ATPase 217 372 - -
Phac9g03469 590 PRINTS H+-transporting ATPase (proton pump) signature 324 340 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03469 590 PRINTS H+-transporting ATPase (proton pump) signature 355 380 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03469 590 PRINTS H+-transporting ATPase (proton pump) signature 181 199 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03469 590 PRINTS H+-transporting ATPase (proton pump) signature 296 312 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03469 590 PRINTS H+-transporting ATPase (proton pump) signature 496 517 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03469 590 Gene3D - 225 361 IPR023214 -
Phac9g03469 590 PANTHER CALCIUM-TRANSPORTING ATPASE 165 582 - -
Phac9g03469 590 Gene3D - 34 136 - -
Phac9g03469 590 Gene3D - 162 224 IPR023299 GO:0000166
Phac9g03469 590 NCBIfam HAD-IC family P-type ATPase 299 410 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03469 590 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 164 227 IPR023299 GO:0000166
Phac9g03469 590 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Phac9g03469 590 Pfam haloacid dehalogenase-like hydrolase 193 338 - -
Phac9g03469 590 PRINTS P-type cation-transporting ATPase superfamily signature 324 343 - -
Phac9g03469 590 PRINTS P-type cation-transporting ATPase superfamily signature 241 251 - -
Phac9g03469 590 PRINTS P-type cation-transporting ATPase superfamily signature 219 230 - -
Phac9g03469 590 PRINTS P-type cation-transporting ATPase superfamily signature 347 359 - -
Phac9g03469 590 Gene3D - 362 551 - -
Phac9g03469 590 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Phac9g03469 590 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 581 IPR023298 -
Phac9g03469 590 Gene3D - 66 120 - -
Phac9g03469 590 FunFam ATPase 4 plasma membrane-type 310 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03469 Phac-Chr9 34018762 34024796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03469 162 588 Primary Pumps ATPases AT3G42640 82.051 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03469 K01535 - gmx:102668626 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g03469 9 34018762 34024796 Phac9g03469 9 34018762 34024796 ECH
Phac3g02967 3 31226891 31234744 Phac9g03469 9 34018762 34024796 ECH