Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03465 ATGTCTTCTACCCAAGGGGGAGGACCTACTCCTACACTAACCAAGGCTGAGGTTCCTTGGTCAGCCAGAAGGGGAAGTCTATCTGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAATAAGTTAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCTGCTGACATCTTGAAGGATGTCATTTCACTTATTTTTGACAAGGCTGTTCTAGAACCAACATTTTGCCCAATGTATGCACTTCTGTGTTCTGATCTGAATGAAAAACTGCCTCCATTCCCATCTGGGGAACCTGATGGGAAGGAAATCACCTTTAAGAGAGTATTATTGAATAATTGCCAGGAGGCATTTGAAGGTGTGGAACTAAAAAGAATGGCTGTCCCTGAGCAGGAGACGGAGCGTATGGACAAGGAAAGACTGCTCAAGCTTCGGACTCTTGGAAATATTCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGATCCCCAGACAGCAAATCTTGTCCTGTTGAGGAAAATGTGGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCTAAATCGCGGCGAATAAATGATATTTACTTTAGTCGATTGAAAGAATTGAGCTCAAATCTACAACTTGTACCCCGGCTTAGGTTCATGATTCGAGATGTTCTAGACTTACGTGCTAGTAACTGGGTTCCTAGACGGGAAGAGATCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGTTTGCGACCAGGTGCCACTGCAAATATGAGAAATACCCGTGGTGGTGTTCATGGAAATTTTAGCCCCGGGGGTTTCCCTATTTCCCGACCTGGTACAGGGGGTCTGATGCCTGGAATGCCAGGGAGCAGAAAGATGCCTGGGATGCCTGGATTTGATAATAGCAACTGGGAGATGCCTAAATCTAGATCTATGCCAAGAGGAGACTTCTCAGGTGTTCAAGCTGCTGGATCCAATAGCCCTTTACTTTCCAAGCCCACAATCCTTAATTCAAAATTGCTACCTCAAGGGAGTAGTGGTATTGTAAGTGGAAGAAATAGTGCCCTAGTACATGGAGCTGCTACATTTTCTCCTCGACCGGCAAACTTTGGTTTAGGTCCTGAGACAGCATCTCAGCTCTCTTCACACGATAGAACAGTTGCTCCTGTTCCTGTATCCTCTGGGAAGTCACAAGCACCAGCCGGTGGATTGAATAGTGATGATCTTCGACGCAAAACTATCTCTCTTCTACAAGAATATTTCAGTGTTCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAATTGAAATCTCCTTCTTTTTACCCTGAGGTTGTTAAGGAAGCCATTTACCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAATCTCTTGGAGTATCTATACATTAAGAAGATTCTTACTGCTATAGATATCGAGGCCGGCTGTTTGTTATTCGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAATCACCTAGTAATTTTGGTGTGATAATTGGGAAACTAATTTTGGCTGGGGGATTAGATTTTAAGGTGGCGAGAGAGATTCTCAAGAAGGTGGAAGATGACATGTTCCAGAGAGAAATATTTGACAGTGCGGTAGGGGCCATTAAATCTTCTGCATCCGGACAAGCAGTGTTGGATTTACAAACATCTGATATTAAGGCCTGCCAGAGTCTGCTCAAGTGA 1821 0.4327 MSSTQGGGPTPTLTKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSGEPDGKEITFKRVLLNNCQEAFEGVELKRMAVPEQETERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSKSCPVEENVEAICQFFNTIGKQLDESPKSRRINDIYFSRLKELSSNLQLVPRLRFMIRDVLDLRASNWVPRREEIKAKTITEIHSEAEKNLGLRPGATANMRNTRGGVHGNFSPGGFPISRPGTGGLMPGMPGSRKMPGMPGFDNSNWEMPKSRSMPRGDFSGVQAAGSNSPLLSKPTILNSKLLPQGSSGIVSGRNSALVHGAATFSPRPANFGLGPETASQLSSHDRTVAPVPVSSGKSQAPAGGLNSDDLRRKTISLLQEYFSVRLLDEALQCVEELKSPSFYPEVVKEAIYLALDKSPPCVEPVANLLEYLYIKKILTAIDIEAGCLLFGSLLDDIGIDLPKSPSNFGVIIGKLILAGGLDFKVAREILKKVEDDMFQREIFDSAVGAIKSSASGQAVLDLQTSDIKACQSLLK* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03465 606 FunFam Eukaryotic translation initiation factor isoform 4G-2 434 596 - -
Phac9g03465 606 SMART ma3_7 441 553 IPR003891 -
Phac9g03465 606 Pfam MIF4G domain 34 255 IPR003890 GO:0003723|GO:0005515
Phac9g03465 606 ProSiteProfiles MI domain profile. 440 562 IPR003891 -
Phac9g03465 606 Pfam MA3 domain 441 553 IPR003891 -
Phac9g03465 606 SUPERFAMILY ARM repeat 435 591 IPR016024 -
Phac9g03465 606 Gene3D - 25 256 - -
Phac9g03465 606 Gene3D - 435 604 - -
Phac9g03465 606 MobiDBLite consensus disorder prediction 1 24 - -
Phac9g03465 606 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 10 600 IPR045208 GO:0003743
Phac9g03465 606 SMART if4_15 34 255 IPR003890 GO:0003723|GO:0005515
Phac9g03465 606 SUPERFAMILY ARM repeat 28 258 IPR016024 -
Phac9g03465 606 FunFam Eukaryotic translation initiation factor isoform 4G-2 25 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03465 Phac-Chr9 33983098 33988446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03465 1 604 Eukaryotic Initiation Factors Gene Family AT5G57870 65.359 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03465 K03260 - gmx:100800438 1002.66