Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03463 ATGCAGCAGGCTGATTCAACGGTTCTAAGCTTGAGGCCTGGCGGCGGTCGTGGCGGCGGAAGCAGGCTTTTTGCTCTCTCCTCCTCCTCCTTCACTTCCTCCGCCGATCTCCCTCTCACGCGCCCCCATGCGTCTTTCTCTCTCAAGACCGGAGATTCACGTTTTGAGGTTCGTGAACGTGTGCAATATACCAGAGATAAGCTTTTGCAGCTTCAAGAGGCTATTGTTGACGTCCCTGATGATATTCTGAAAATTAAGCAAGATATAGAAGCTGAACTTTTTGGTGAAAATCAAAGTTGGGGAGGACGTGCTGACAGCAATCCTCCTCCTCAACTACAAAATCGGTATCCTGAGACAGATAATCGTGATTGGCGTGGTCGTTCTGGACAACTTCCTGCTAGTCCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAGTAGTCAGTTTGCAAGGACACAAATGTCTTCTACCCAAGGGGGAGGACCTACTCCTACACTAACCAAGGCTGAGGTTCCTTGGTCAGCCAGAAGGGGAAGTCTATCTGAAAAGGATCGTGTCTTAAAGACTGTGAAAGGAATACTGAATAAGTTAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCTGCTGACATCTTGAAGGATGTCATTTCACTTATTTTTGACAAGGCTGTTCTAGAACCAACATTTTGCCCAATGTATGCACTTCTGTGTTCTGATCTGAATGAAAAACTGCCTCCATTCCCATCTGGGGAACCTGATGGGAAGGAAATCACCTTTAAGAGAGTATTATTGAATAATTGCCAGGAGGCATTTGAAGGTGTGGAACTAAAAAGAATGGCTGTCCCTGAGCAGGAGACGGAGCGTATGGACAAGGAAAGACTGCTCAAGCTTCGGACTCTTGGAAATATTCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGATCCCCAGACAGCAAATCTTGTCCTGTTGAGGAAAATGTGGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCTAAATCGCGGCGAATAAATGATATTTACTTTAGTCGATTGAAAGAATTGAGCTCAAATCTACAACTTGTACCCCGGCTTAGGTTCATGATTCGAGATGTTCTAGACTTACGTGCTAGTAACTGGGTTCCTAGACGGGAAGAGATCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGTTTGCGACCAGGTGCCACTGCAAATATGAGAAATACCCGTGGTGGTGTTCATGGAAATTTTAGCCCCGGGGGTTTCCCTATTTCCCGACCTGGTACAGGGGGTCTGATGCCTGGAATGCCAGGGAGCAGAAAGATGCCTGGGATGCCTGGATTTGATAATAGCAACTGGGAGATGCCTAAATCTAGATCTATGCCAAGAGGAGACTTCTCAGGTGTTCAAGCTGCTGGATCCAATAGCCCTTTACTTTCCAAGCCCACAATCCTTAATTCAAAATTGCTACCTCAAGGGAGTAGTGGTATTGTAAGTGGAAGAAATAGTGCCCTAGTACATGGAGCTGCTACATTTTCTCCTCGACCGGCAAACTTTGGTTTAGGTCCTGAGACAGCATCTCAGCTCTCTTCACACGATAGAACAGTTGCTCCTGTTCCTGTATCCTCTGGGAAGTCACAAGCACCAGCCGGTGGATTGAATAGTGATGATCTTCGACGCAAAACTATCTCTCTTCTACAAGAATATTTCAGTGTTCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAATTGAAATCTCCTTCTTTTTACCCTGAGGTTGTTAAGGAAGCCATTTACCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAATCTCTTGGAGTATCTATACATTAAGAAGATTCTTACTGCTATAGATATCGAGGCCGGCTGTTTGTTATTCGGTTCTCTGCTGGATGATATTGGCATAGATTTACCTAAATCACCTAGTAATTTTGGTGTGATAATTGGGAAACTAATTTTGGCTGGGGGATTAGATTTTAAGGTGGCGAGAGAGATTCTCAAGAAGGTGGAAGATGACATGTTCCAGAGAGAAATATTTGACAGTGCGGTAGGGGCCATTAAATCTTCTGCATCCGGACAAGCAGTGTTGGATTTACAAACATCTGATATTAAGGCCTGCCAGAGTCTGCTCAAGTGA 2283 0.4446 MQQADSTVLSLRPGGGRGGGSRLFALSSSSFTSSADLPLTRPHASFSLKTGDSRFEVRERVQYTRDKLLQLQEAIVDVPDDILKIKQDIEAELFGENQSWGGRADSNPPPQLQNRYPETDNRDWRGRSGQLPASPDERSWENLRDNSSQFARTQMSSTQGGGPTPTLTKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSGEPDGKEITFKRVLLNNCQEAFEGVELKRMAVPEQETERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSKSCPVEENVEAICQFFNTIGKQLDESPKSRRINDIYFSRLKELSSNLQLVPRLRFMIRDVLDLRASNWVPRREEIKAKTITEIHSEAEKNLGLRPGATANMRNTRGGVHGNFSPGGFPISRPGTGGLMPGMPGSRKMPGMPGFDNSNWEMPKSRSMPRGDFSGVQAAGSNSPLLSKPTILNSKLLPQGSSGIVSGRNSALVHGAATFSPRPANFGLGPETASQLSSHDRTVAPVPVSSGKSQAPAGGLNSDDLRRKTISLLQEYFSVRLLDEALQCVEELKSPSFYPEVVKEAIYLALDKSPPCVEPVANLLEYLYIKKILTAIDIEAGCLLFGSLLDDIGIDLPKSPSNFGVIIGKLILAGGLDFKVAREILKKVEDDMFQREIFDSAVGAIKSSASGQAVLDLQTSDIKACQSLLK* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03463 760 Gene3D - 589 758 - -
Phac9g03463 760 Pfam MIF4G domain 188 409 IPR003890 GO:0003723|GO:0005515
Phac9g03463 760 FunFam Eukaryotic translation initiation factor isoform 4G-2 179 410 - -
Phac9g03463 760 SUPERFAMILY ARM repeat 182 412 IPR016024 -
Phac9g03463 760 SMART if4_15 188 409 IPR003890 GO:0003723|GO:0005515
Phac9g03463 760 Gene3D - 179 410 - -
Phac9g03463 760 MobiDBLite consensus disorder prediction 96 170 - -
Phac9g03463 760 FunFam Eukaryotic translation initiation factor isoform 4G-2 588 750 - -
Phac9g03463 760 Pfam MA3 domain 595 707 IPR003891 -
Phac9g03463 760 SMART ma3_7 595 707 IPR003891 -
Phac9g03463 760 MobiDBLite consensus disorder prediction 100 117 - -
Phac9g03463 760 MobiDBLite consensus disorder prediction 144 165 - -
Phac9g03463 760 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 52 754 IPR045208 GO:0003743
Phac9g03463 760 SUPERFAMILY ARM repeat 589 745 IPR016024 -
Phac9g03463 760 ProSiteProfiles MI domain profile. 594 716 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03463 Phac-Chr9 33982682 33988446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03463 1 758 Eukaryotic Initiation Factors Gene Family AT5G57870 60.985 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03463 K03260 - gmx:100816500 1184.47