Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03456 ATGACAGACTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTTTGGTTTGCTGGCCGTTGATGACTATAGCAATCAAAGTGATTGATACTGCCTTAAGAGATGACTTCGGTTTCAAACACGTTCTATGGGTATACAGTGGACGCAGAGGTGTTCATTGCTGGGTCTGTGACGGGAAGGCAAGAAGGTTGTCTAATGAGCAGAGAGGTGCTATTGCTGACTATTTTCGTGTGTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGACGGGTGCTGCCCTTCATCCTTTCTTGGCGACATCATACACTAATGTTCTCAAGGACTATTTCGAGAAAAATCTGCTTACCGGACAAAATTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTAAACATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATAAATGTTGTTCGATGGGAACAATTCAAACAGTTGCTGCAATCTGGAAAACATAAGGCGCAAGGGCTGCGCCGATGTGTTGAAGAGATTGTGTTCTCCTTTACATATCCCAGGCTAGATATGGAGGTTTCTAAACATATGAATCACTTGCTTAAAGCACCATTCTGTGTACATCCTAAAACAGGTCGTGTTTGTGTTCCTATTGATCCAAATCGGTGTGACGAATTTGATCCTACTACAGTACCCACCCTTTCACAGCTGATAGAGGAGCTTAATTACGAGGGCTCAATATCTGATATTGATGGTGAATTGAATAGAACTTCCATTGGAAATGCCATTACGCTCTTCAGATCGTCATTCTTACAGCCTTTACTAAAAGCCTGCAAGGAAGAGATAGAAAATTCGTATAACTTAAAGTTGCAGCAGTCAAAGAATTCTCTTGGTTGGTAG 939 0.4143 MTDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHVLWVYSGRRGVHCWVCDGKARRLSNEQRGAIADYFRVYKGNENSHKKVSLTGAALHPFLATSYTNVLKDYFEKNLLTGQNLLATEERYEKILNMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQFKQLLQSGKHKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLSQLIEELNYEGSISDIDGELNRTSIGNAITLFRSSFLQPLLKACKEEIENSYNLKLQQSKNSLGW* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03456 312 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 1 253 IPR014052 GO:0003896|GO:0006269
Phac9g03456 312 CDD AE_Prim_S 1 241 IPR014052 GO:0003896|GO:0006269
Phac9g03456 312 SUPERFAMILY Prim-pol domain 1 255 - -
Phac9g03456 312 PANTHER DNA PRIMASE SMALL SUBUNIT 1 297 - -
Phac9g03456 312 Pfam DNA primase small subunit 1 232 IPR002755 GO:0003896|GO:0006269
Phac9g03456 312 Gene3D DNA primase, PRIM domain 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03456 Phac-Chr9 33924573 33929435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03456 1 312 Core DNA Replication Machinery Family AT5G41880 66.454 2.95e-161 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03456 K02684 - gmx:100780574 618.231