Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03455 ATGATCCCACAACAAGAACCCGATTTCAATCTCAATCACCTCAAGCTATATTACGGAAAGCTGTTTCCTTTTGTTGATTTAGTCAGATGGGTGTCTTATGGCAACGATGGCAAGCACCCAGGTTGTGATCAATCCTACTTGGGGCGAAGAGAGTTTTCCTTCACTTTGGAGAATGATATTTATCTGCGTTTCCAATCTTTCAACAATACCCTTGAGCTCGAAAATTCAGTCAAAGAGAAGTCCCCTGTTAAGATAGATATTGGACCTGTCTACTCTGTTGATCCTGCAAAAAGGTATGCCTATGCACAGGGTGAAAATAACGTCTTTGCCCCAGTTGAGAGAGAGTTGATTTTTGATATAGATATGACAGACTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTTTGGTTTGCTGGCCGTTGATGACTATAGCAATCAAAGTGATTGATACTGCCTTAAGAGATGACTTCGGTTTCAAACACGTTCTATGGGTATACAGTGGACGCAGAGGTGTTCATTGCTGGGTCTGTGACGGGAAGGCAAGAAGGTTGTCTAATGAGCAGAGAGGTGCTATTGCTGACTATTTTCGTGTGTACAAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGACGGGTGCTGCCCTTCATCCTTTCTTGGCGACATCATACACTAATGTTCTCAAGGACTATTTCGAGAAAAATCTGCTTACCGGACAAAATTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTAAACATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATAAATGTTGTTCGATGGGAACAATTCAAACAGTTGCTGCAATCTGGAAAACATAAGGCGCAAGGGCTGCGCCGATGTGTTGAAGAGATTGTGTTCTCCTTTACATATCCCAGGCTAGATATGGAGGTTTCTAAACATATGAATCACTTGCTTAAAGCACCATTCTGTGTACATCCTAAAACAGGTCGTGTTTGTGTTCCTATTGATCCAAATCGGTGTGACGAATTTGATCCTACTACAGTACCCACCCTTTCACAGGTAAACTTATTCTGCAATGACAATTTTCTGACCTGCATTCAAGGGAGGGGAAAGCTTTCCACTGGCTCAGTTATTTGCGTAGTTTTCGTTAGGCATGTTCCTATTTATTACTTAGAGAGTGTATTTGGAACATGCATAATGAAACTTGCTCCCTTGTCCAACACATTTTCATGTGGAAAAGGGAAATATCACCTTTTGACATGGCTAAAGTGGGGGTATAAAGTATGCCTGTATTCCACCGTTGCATTTGTAGTTTTGTACCATCAAAAAACTTTCTGA 1389 0.4118 MIPQQEPDFNLNHLKLYYGKLFPFVDLVRWVSYGNDGKHPGCDQSYLGRREFSFTLENDIYLRFQSFNNTLELENSVKEKSPVKIDIGPVYSVDPAKRYAYAQGENNVFAPVERELIFDIDMTDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHVLWVYSGRRGVHCWVCDGKARRLSNEQRGAIADYFRVYKGNENSHKKVSLTGAALHPFLATSYTNVLKDYFEKNLLTGQNLLATEERYEKILNMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQFKQLLQSGKHKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLSQVNLFCNDNFLTCIQGRGKLSTGSVICVVFVRHVPIYYLESVFGTCIMKLAPLSNTFSCGKGKYHLLTWLKWGYKVCLYSTVAFVVLYHQKTF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03455 462 FunFam DNA primase 1 379 - -
Phac9g03455 462 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 15 367 IPR014052 GO:0003896|GO:0006269
Phac9g03455 462 PANTHER DNA PRIMASE SMALL SUBUNIT 5 371 - -
Phac9g03455 462 SUPERFAMILY Prim-pol domain 11 371 - -
Phac9g03455 462 CDD AE_Prim_S 23 362 IPR014052 GO:0003896|GO:0006269
Phac9g03455 462 Pfam DNA primase small subunit 118 353 IPR002755 GO:0003896|GO:0006269
Phac9g03455 462 Gene3D DNA primase, PRIM domain 2 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03455 Phac-Chr9 33924573 33929435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03455 3 371 Core DNA Replication Machinery Family AT5G41880 68.564 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03455 K02684 - gmx:100780574 736.873