Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03450 ATGATGGGTGAGAAAAGCAGCACCGGCGAGGCTAATAACTCCATGCTGCTACACGGCAAGTACGAGCTAGGGCGGCTACTGGGGCACGGAACCTTCGCCAAGGTGTACCACGCGCGGAACCTCAAGAGCGGAAAGAACGTCGCCATGAAGGTGGTGGGGAAGGAGAAAGTGATGAAAGTGGGGATGATGGAGCAGATAAAAAGGGAGATCTCGGCCATGAACATGGTGAAGCACCCCAGCATCGTGCAGCTCCACGAGGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGCGAGCTCTTTAACAAGATCTCCCGCGGCCGCCTCAGAGAGGAGACGGCGCGCCTCTACTTCCAGCAGCTCGTCTCCGCCGTCGACTTCTGCCACAGCCGTGGCGTCTACCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGGACGGCAACCTCAAAGTCACCGACTTCGGCCTCAGCACCTTCTCCGAGCACCTCCGCCAGGACGGCCTGCTTCACACCACGTGCGGCACCCCGGCCTACGTGGCGCCGGAGGTCATCGGGAAAAAAGGCTACGACGGCGCCAAGGCTGATATCTGGTCTTGCGGTGTAATCCTCTATGTTCTCCTCGCAGGGTTTTTACCCTTCCAGGATGACAACTTGGTTGCCTTGTATAAGAAAATTTACCGCGGTGACTTCAAGTGCCCGCCGTGGTTTTCATCCGAAGCACGCCGACTCATTACGAAGCTCCTCGACCCGAACCCGAATAACCGAATAACGATTTCGAAGATCATGGAGTCGTCCTGGTTTAAGAAACCGGTTCCGAAGAACGTTATGGGAGTGAAGAGAGAGGAGTTGGATTTGGAGGAAAAGATTAAGCAGCAGGAAGAATGTAAGTCCAGCACGATGAATGCTTTTCATATAATTTCGCTTTCGGAGGGTTTCGATTTGTCGCCCTTGTTCGAGGAGAAAAAGAGGGAGGAGAAGGAGATTCGTTTTGCGACCACGCGCCCCGCGAGCAGCGTGATTTCGCGGCTGGAGGAGGTGGCGAAGGCGGTGAAGTTTGACGTTAAGAAAAGTGAGAGCAAAGTGAGGTTGCAGGGTCAAGAGCGGGGTCGGAAAGGGAAGCTTGCAATTGCTGCGGATTTATACGCCGTGACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAGGACAACGGTGACACCTTAGAGTACAACCAGTTCTGCAGCAACCAACTTCGTCCTGCGCTTAAAGACATCGTTTGGAGGACTTCCCCTCCTGAGAATCCTACACCTGCTTGA 1317 0.5513 MMGEKSSTGEANNSMLLHGKYELGRLLGHGTFAKVYHARNLKSGKNVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPSIVQLHEVMASKSKIYIAMELVRGGELFNKISRGRLREETARLYFQQLVSAVDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNNRITISKIMESSWFKKPVPKNVMGVKREELDLEEKIKQQEECKSSTMNAFHIISLSEGFDLSPLFEEKKREEKEIRFATTRPASSVISRLEEVAKAVKFDVKKSESKVRLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSNQLRPALKDIVWRTSPPENPTPA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03450 438 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03450 438 FunFam Non-specific serine/threonine protein kinase 303 427 - -
Phac9g03450 438 CDD STKc_SnRK3 20 274 - -
Phac9g03450 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 423 - -
Phac9g03450 438 Pfam NAF domain 306 364 IPR004041 GO:0007165
Phac9g03450 438 FunFam Non-specific serine/threonine protein kinase 11 307 - -
Phac9g03450 438 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03450 438 Gene3D Transferase(Phosphotransferase) domain 1 103 280 - -
Phac9g03450 438 CDD CIPK_C 309 423 - -
Phac9g03450 438 Gene3D Kinase associated domain 1, KA1 303 428 - -
Phac9g03450 438 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Phac9g03450 438 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Phac9g03450 438 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03450 438 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Phac9g03450 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Phac9g03450 438 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Phac9g03450 438 SUPERFAMILY Protein kinase-like (PK-like) 18 276 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03450 Phac-Chr9 33891526 33894278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03450 6 431 CBL-interacting serine-threonine protein kinases AT4G30960 73.624 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac9g03450 Pkinase 4.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03450 - K07198 gmx:547644 790.801