Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03438 ATGGGGAAGCACCAAAGACACAAAATCAATGCAAGCACTAACACTGACCTTAACGCAACCAACACTGTCCTCACCAAGGTCAAACGAACAAGAAGAAGTGTCCCTAGAGATTCCCCTCCTCAACGCAGCTCAATATACAGAGGAGTCACTAGGCACCGATGGACAGGCCGATATGAAGCACATTTGTGGGACAAGAATTGCTGGAATGAGTCACAGAACAAGAAAGGACGACAAGGTGCTTATGACGATGAAGAGGCTGCAGCACACGCTTACGATCTAGCAGCATTGAAATACTGGGGTCAAGATACCATCCTTAATTTTCCATTATCAACCTACCAGAATGAAGTAAAAGAAATGGAGTGTCAATCACGGGAAGAGTACATTGGATCATTAAGAAGGAAAAGCAGCGGTTTTTCTCGTGGAGTGTCTAAATACAGAGGTGTTGCAAGACACCATCATAACGGAAGATGGGAGGCTCGGATTGGCAGGGTTTTTGGCAACAAATATCTTTACCTCGGAACTTACGCAACACAAGAAGAAGCTGCCACAGCATATGACATGGCAGCTATTGAATATCGAGGACTCAACGCTGTGACCAATTTCGACCTTAGCCGCTACATCAAGTGGCTTAAGCCCAACAACAACGATAACACTGTGAACTCTAATATTCTTCACGCTAACCCTAACCCTAATTCTGAGACCAACTCTACCCCAAACTCTAATGAACAACAAGGCTTCAATTTTTTCCAGAGTCAAGAATCGACAATGGCTCAGCCTCGACCATCTGGCGCCACGTCAGCCCTAGGACTTTTGCTTCAGTCGTCCAAGTTCAAGGAGATGATGGAGATGACTTCCGCCGCGGATTTGTCGACGGAAAGGTCGGAGTCTGAGTTGCTGCCGTGCACATTTCCCGATGACATTCAGACCTATTTCGAGTGTGAAGATTCCAATATATATGGAGAAGGGGCTGATAACATGTTCAGCGAGCTCAACAGCTTTGTGCCCCATATGTTCCATTGTGATGAGTTTGAGTCTTGA 1038 0.4586 MGKHQRHKINASTNTDLNATNTVLTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPLSTYQNEVKEMECQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNDNTVNSNILHANPNPNSETNSTPNSNEQQGFNFFQSQESTMAQPRPSGATSALGLLLQSSKFKEMMEMTSAADLSTERSESELLPCTFPDDIQTYFECEDSNIYGEGADNMFSELNSFVPHMFHCDEFES* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03438 345 Gene3D AP2/ERF domain 143 204 IPR036955 GO:0003700|GO:0006355
Phac9g03438 345 Gene3D AP2/ERF domain 45 110 IPR036955 GO:0003700|GO:0006355
Phac9g03438 345 CDD AP2 143 204 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 SUPERFAMILY DNA-binding domain 44 110 IPR016177 GO:0003677
Phac9g03438 345 SMART rav1_2 144 208 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 SMART rav1_2 45 114 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 SUPERFAMILY DNA-binding domain 143 204 IPR016177 GO:0003677
Phac9g03438 345 MobiDBLite consensus disorder prediction 1 21 - -
Phac9g03438 345 ProSiteProfiles AP2/ERF domain profile. 144 202 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 MobiDBLite consensus disorder prediction 7 21 - -
Phac9g03438 345 FunFam AP2-like ethylene-responsive transcription factor 44 110 - -
Phac9g03438 345 Pfam AP2 domain 45 100 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 Pfam AP2 domain 143 194 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 ProSiteProfiles AP2/ERF domain profile. 45 108 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 PRINTS Ethylene responsive element binding protein signature 184 204 IPR001471 GO:0003700|GO:0006355
Phac9g03438 345 MobiDBLite consensus disorder prediction 220 244 - -
Phac9g03438 345 FunFam AP2-like ethylene-responsive transcription factor 143 204 - -
Phac9g03438 345 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03438 Phac-Chr9 33821061 33825206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03438 41 206 AP2-EREBP Transcription Factor Family AT5G57390 71.006 2.07e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac9g03438 AP2 3.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03438 K09285 - gmx:100804555 581.637