Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03418 ATGGAAGCCAGCGCTGGACTGGTCGCTGGTTCACATAACCGTAATGAGCTCGTTGTCATTCATGGCCATGAAGAGCACAAGCCTTTGAAGAACTTGGATGGTCAAGTATGTGAGATTTGTGGTGATGGCGTGGGACTCACGGTGGATGGAGACTTATTTGTGGCTTGCAATGAGTGTGGTTTTCCAGTGTGCAGGCCTTGCTATGAGTATGAAAGGAGAGAAGGGGGCCAGCTTTGCCCACAGTGCAAAACCAGATATAAGCGTCTCAAAGGGAGCCCGCGGGTGGAGGGAGATGACGAGGAGGAGGATGTGGATGATATTGAGCATGAGTTCAATATTGATGACGAAAAGGACAAGCATGGCCATGCTGCAGAGGCCATGCTTCATGGAAAAATGAGCTATGGAAGAGGTCCTGAAGATGATGAGAATTCCCAGTTCCCAATACCTGTCATTTCTGGGGGCCGTTCTAGGCCTGTTAGTGGGGAATTCCCAATATCATCTAATGGTTATGGGGAGCAAATGTTGTCTTCTTCACTGCATAAACGAGTGCATCCATATCCAATGTCTGAACCTGGGAGTGCCAGATGGGATGAAAAGAAAGAGGATGGATGGAAAGAAAGGATGGAGGACTGGAAATTGCAGCAAGGCAATTTGGGGCCTGAACCTGATGAAGATCCAGATGCAGCCATGTTAGAGGAAGCAAGGCAACCACTTTCAAGGAAAGTACCAATAGCATCTAGCAAAATCAATCCATATAGAATGGTGATTGTGGCCCGCCTTGTCATTCTTGCTTTCTTCCTCAGATACAGACTTATGAATCCTGTACATGATGCAATGGGGCTGTGGCTTACCTCTATCATATGTGAAATATGGTTTGCTTTTTCATGGATTCTGGATCAGTTCCCCAAATGGTTTCCCATTGATCGAGAGACCTACCTTGACCGTCTTTCCATGAGGTACGAGCGTGAAGGTGAACCAAACATGCTTGCTCCTGTAGATGTCTTTGTTAGTACCGTGGATCCAATGAAGGAACCTCCTCTGGTTACGGGAAACACTGTTCTTTCAATCTTGGCCATGGATTACCCAGTTGATAAGATATCATGCTATATTTCTGATGATGGAGCCTCAATGTGTTCATTTGAGTCCCTGTCAGAAACTGCAGAGTTTGCTAAGAAGTGGGTACCGTTTTGTAAGAAATTTTCTATAGAACCTCGGGCACCTGAGATGTACTTCAGTGAGAAGATAGACTACTTAAAGGACAAAGTGCAACCCACCTTTGTTAAGGAGCGTCGAGCCATGAAGAGGGAATACGAAGAGTTTAAGGTTAGGATCAATGCACTTGTTGCAAAAGCCCAGAAAGTTCCTCAGGGAGGATGGATTATGCAGGATGGGACACCATGGCCAGGAAACAACACTAAGGATCATCCTGGCATGATTCAAGTTTTTCTTGGAAGCAATGGGGGTCTTGATACTGAAGGAAACCAGCTTCCTCGTCTTGTTTATGTTTCCAGAGAGAAAAGACCTGGTTTTCAACACCACAAGAAAGCTGGCGCCATGAATGCTCTGGTTCGGGTATCTGCTGTTCTCACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCACTATGTCAATAACAGCAAGGCTGCCCGAGAGGCCATGTGCTTCTTGATGGACCCCCAGATCGGGAAGAAGGTTTGCTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATGCACATGATCGTTATGCCAACAGAAACACAGTTTTCTTTGATATAAACATGAAGGGTCTAGATGGTATTCAAGGACCTGCATATGTGGGGACTGGGTGTGTTTTCAGGAGGCAAGCTTTGTATGGCTATAATCCTCCAAAGGGTCCCAAGCGTCCAAAAATGGTAAGCTGTGATTGCTGCCCATGTTTTGGAAGCCGCAAGAAGTACAAGGAGAAGAAGAGCGATGCAAATGGAGAGGCTGCTGCAAGCCTAAAAGGGATGGATGATGACAAAGAGATGCTGATGTCCCATATGAATTTTGAGAAGAAATTTGGACAGTCCTCTATCTTTGTGACTTCTACCTTGATGGAAGAGGGTGGTGTGCCTCCTTCTTCGAGTCCAGCTGCACTGCTTAAAGAAGCCATTCATGTGATCAGCTGTGGATATGAAGATAAAACTGAATGGGGCCTTGAGCTTGGTTGGATCTATGGATCTATTACAGAAGATATTCTAACAGGCTTTAAGATGCATTGCCGCGGGTGGAGGTCTATTTACTGTATGCCAAAGAGAGCTGCATTCAAGGGAACTGCTCCAATCAACTTGTCAGATCGTCTCAATCAGGTGCTTCGTTGGGCACTTGGTTCCATTGAGATTTTCTTCAGTCACCATTGCCCTCTATGGTATGGATTAAAGGAAAAGAAGCTAAAGTGGCTTGAGAGATTTGCCTATGCAAACACAACTGTGTATCCATTCACCTCCATTCCTCTTGTTGCCTATTGTATTCTTCCTGCAGTTTGCTTACTCACTGACAAATTCATCATGCCACCGATAAGCACCTTTGCGGGTTTGTACTTTATTGCTCTCTTCTCTTCAATCATTGCAACTGGTGTTCTTGAGTTGAAATGGAGTGGAGTGAGCATTGAAGAATGGTGGAGAAATGAGCAGTTTTGGGTGATTGGTGGGGTATCAGCTCATCTTTTTGCTGTGATACAAGGTCTGCTAAAGGTTCTGGCTGGAATTGACACCAACTTCACTGTTACATCCAAGGCAACAGATGATGAGGAGTTTGGAGAACTATACACCTTTAAGTGGACTACTCTCCTAATTCCTCCAACCACTATCTTGATCATTAACATTGTTGGTGTTGTTGCTGGAATCTCAGATGCCATAAACAATGGGTACCAATCCTGGGGCCCACTATTTGGAAAGCTCTTCTTTTCTTTCTGGGTCATTGTCCATCTGTATCCATTCCTTAAAGGTTTGATGGGTCGGCAAAACCGCACACCCACCATTGTTGTGATTTGGTCAGTTCTATTGGCTTCTATTTTCTCCTTGCTGTGGGTAAGAATTGATCCATTTGTCCTCAAGACTAAGGGACCTGATACCAAACTATGTGGAATCAACTGCTGA 3126 0.4495 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDGVGLTVDGDLFVACNECGFPVCRPCYEYERREGGQLCPQCKTRYKRLKGSPRVEGDDEEEDVDDIEHEFNIDDEKDKHGHAAEAMLHGKMSYGRGPEDDENSQFPIPVISGGRSRPVSGEFPISSNGYGEQMLSSSLHKRVHPYPMSEPGSARWDEKKEDGWKERMEDWKLQQGNLGPEPDEDPDAAMLEEARQPLSRKVPIASSKINPYRMVIVARLVILAFFLRYRLMNPVHDAMGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSMRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTGNTVLSILAMDYPVDKISCYISDDGASMCSFESLSETAEFAKKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGSNGGLDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQIGKKVCYVQFPQRFDGIDAHDRYANRNTVFFDINMKGLDGIQGPAYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRKKYKEKKSDANGEAAASLKGMDDDKEMLMSHMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGLKEKKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03418 1041 SUPERFAMILY RING/U-box 21 107 - -
Phac9g03418 1041 FunFam Cellulose synthase 449 623 - -
Phac9g03418 1041 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Phac9g03418 1041 CDD mRING-HC-C4C4_CesA 35 85 - -
Phac9g03418 1041 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 235 1008 - -
Phac9g03418 1041 SUPERFAMILY Nucleotide-diphospho-sugar transferases 346 842 IPR029044 -
Phac9g03418 1041 Pfam Cellulose synthase 332 1035 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phac9g03418 1041 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Phac9g03418 1041 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 478 623 IPR029044 -
Phac9g03418 1041 Coils Coil 430 450 - -
Phac9g03418 1041 FunFam Cellulose synthase 19 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03418 Phac-Chr9 33598633 33604320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03418 1 1041 Cell Wall Biosynthesis AT5G17420 85.701 0.0 1840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03418 K10999 - gmx:100815436 2072.36