Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03401 ATGCAGCATATACATTCCATCTGCGGCGGTGACCGCAGGCTCAGGCCGCACCACCACAACCACCACCAGCCGCTAAAGTGCCCTCGCTGTGACTCACTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCCCAGCCACGCCATTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGCGGCGTCCTTCGCAATGTCCCCGTCGGCGGTGGTTGCCGTAAATCGAAACGCTCGAACAAGCCCAAAACTACCGCCACCAACACCGACAGCGATAGCAACAACCCTCGCTCTTCCTCGCAGATCGCTCCGGCAACGGCGTCAACGACGCCGTCGGCTGCGGAGGCGGAGCGCAACTCGAACTCCCACTCCAGCAGCGAAAGCTCCACCCTAACGGTCACGGAGGCGATGTCGGCGCCGACATCAAACGCTTTGTCTAAGAACTCTTTGTTTCTCGACAGCGTTCGCGAGTCGAAGCTGTTCGCTAACGCTGATAACCCCTCTTTGGAGGGCGGTGGCATTTTCTCCGAGATAGGGAGCTTCACCGGCCTCATTGCTTCAAACAACGAAGCACTGGGGTTTGGGTTTGGGAATTGCAGTAATAATGACAGCAACGGCAACAGCAACATCCTCGATACGACCCCGTTTCGGTTCGGCGTTTCTCATCCGCAGGGGAATAATCAGGCGCAAGTGGCACCAGGCGGAGAGCAGCAGCAGAATCATGAGGAGTTCGGTACGGCGTCGTTTCTCGATCTGACGGCGCCGCTGGAGTTTTCGTCGTTGGCGCAGAAGAGTGGTCAACATGGAGGGTTTGGGTCGTTGGATTGGCAACCCAGTGGTGCGGATCAAGGTTTGTTTGATCTCCCCAACACCGTTGATCAACCGTACTGGGCCAACACTCATTGGTCTGATCAAGATAATCCTCCTCTCTTTGATCTTCCTTGA 948 0.5601 MQHIHSICGGDRRLRPHHHNHHQPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPKTTATNTDSDSNNPRSSSQIAPATASTTPSAAEAERNSNSHSSSESSTLTVTEAMSAPTSNALSKNSLFLDSVRESKLFANADNPSLEGGGIFSEIGSFTGLIASNNEALGFGFGNCSNNDSNGNSNILDTTPFRFGVSHPQGNNQAQVAPGGEQQQNHEEFGTASFLDLTAPLEFSSLAQKSGQHGGFGSLDWQPSGADQGLFDLPNTVDQPYWANTHWSDQDNPPLFDLP* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03401 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 225 IPR045174 GO:0003700|GO:0006355
Phac9g03401 315 MobiDBLite consensus disorder prediction 1 26 - -
Phac9g03401 315 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Phac9g03401 315 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Phac9g03401 315 MobiDBLite consensus disorder prediction 83 140 - -
Phac9g03401 315 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Phac9g03401 315 MobiDBLite consensus disorder prediction 268 291 - -
Phac9g03401 315 MobiDBLite consensus disorder prediction 69 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03401 Phac-Chr9 33410376 33412019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03401 11 315 C2C2-Dof Transcription Factor Family AT5G60850 38.339 7.22e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac9g03401 zf-Dof 4.6e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g03401 9 33410376 33412019 Phac9g03401 9 33410376 33412019 ECH
Phac3g02769 3 29935449 29939280 Phac9g03401 9 33410376 33412019 PCT