Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03379 ATGGGAGTCAGCAAGCAGAATGAAGGACCAGAGATTTTATCTGATCTGGAGCACAGGAAATCTGTAAGACCAGTTACCAAGGTTTGTAGTCCTGAGAATAACTCCACTGAAGTGGCTGAGTTATCCTTGAGCACAGCTTTGGAGAAAGCTGCTGCTTGTGTTAATGATTTGGTATGTAATGTTACTTCGGATCACAATGAAACCACTACTACTAATAGGGATTATGGGCCACTCCTAGCGAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAATGACACATTCTCAGGAGGTGCTTATACTGGTGTTTCAGTTGTCCATAAAGATTCTGGGAGTCATATGGAAGTTGGTATTGGATCTAAGAGTTCCACCAGTACTCAAAAGGGTTTTGGGTCAGTCTCCATAACATCACGGGATGATTCAGAAATATCTCCACATTTATTACCAGAGTCTAAGAAAACTCGGAACCGAAAAAAATTTGTCTCACGTTGGAGTAATGATGGATGTATTGAGCACAACCTTGAAAACCAGATGTCTGTTAATTTTGCTTCTTCGATAGAAGCTTTCAAGGGCAAAGATAGATTACAGGATACTGCCATTGACACTGATAGTAAAAGTGGTAATGCTGAAAAGGAAGATGAGGGGAAAACCTCAAAATTTGAACCAAATGTTATGAAAGTAGATGAATTCGGAAGACAACTAAGAGAAGGTCTTTCAGATAGTGATTCTGATGATTCATGCCTTCACCGGACAAGGAGGCTAAATAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGACAGGAGGAGTAGGAGGAATAGGAGGAGTCCTCGGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCACCCCGGCATCGAAGAAGCAGTAGGTCTCCAATCTCAAGACGTCCTGGTGACTTTCGTGGTGAGAATATTAAAAGGGACAAGGATCAGTGCTTGGACTTTCTTCGAGGTAAGTGCTATCGAGGAGCATCTTGCAGGTACATTCACCATGAATCTGATATGAATGCTACTTCAAGGCACTATAAGAATAAACATGATTTGGAAGTCAGTTATTATGAAAAAGAATCCAAGACTAATGGAGACATGACGAATATTTCTTCTAAAGTGTTTGATAATGAGCTTGATGGAGTTAGAAGTCGGGATGTGGATCTTAGTTTGAATGTGACTAGCCAGGAAGTAGTGCAGAAAAAAGAAGATTCAGGGAAGAATGTTGTTGCATCAATCATTCATCTTGATGGTCAATCAGTTAATAGCAATCCAGGTAAATCTAAATCTATCAGAGAGGTTTCTCCTGAAATGCAGGAAACCATTGTAGTCAGGGAGGATAGTAAGAATTCAATCCATGAGAATGATGGTTCGGAAGCAGGTGATTCTCAACAGCAACACATGGTTGAAGGCTTTCACCCTGATGCTTTAGGCTGTGATAATACTTCTAAATCATCTGGTACATATAAAGATATTCCCTCAGGAGATGGTCTATTTGTTCAGAAAATGCCACTCAGTGTTTCTTCTGTTGGAATTCAGGAACATTCTGGTTACCCATCTCAGCATGTAAATGCATCCTCTGTGACTGATACATCACATGATAATAGATCAACTGTTTCTACTATTGTTAATGAAGTTCCTGGCAATGTCATATCAGAGCAGGCTTCATTGCACCCTCAGGCTTCAAAAGAGTTACCTCCACAATTTGGCTCTTCAGTGGAATTTCCACATCATAATTACCAGTTGACTGCATCTGTTGTTTCACATTCCCCAGGTGAAAATCCTGTGCATATGCCACAAATTTCAAGGCAGTATGATGTGATGCAACAAAGTGCATTCTTTCCTTTCCAATCCACTACCAGAGAAAAGTTTGAACCTTACCCACCTCCTTTACACATGCAGAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCCTTGCCACTGCCACCGCCACCACTGCCACCGCCACCACCACCAAGAGTGGTGTATGATCCCAGTGTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAATTCATTCAGAATCAATTGCAGTCAAGAACTGAAATTGTTTCCCAGACTTCCATGAAACCTTTACCAACTAGTTCTCAGAATTCTGAATTTCAGGATCTAGGATACCCTCCAATGCAGGATCATTCACGAACTTTCATGCTTGCTGAACCTTTCTCTCCAAAGCAACTTCCTCATGGGAACCCAGCTAGTCAATTGCTTTCAGGATCTAGTCTCAATAGAGATGAATTTCATAATCAACTTCCAAGGCAGGATTCAAAATTTTCCAGTACCACATCGTTTGGCAGCCTGCAGCCTCAACAAAATCAATTTTCCTGGAAATCGGATGTGAACAGACAACAACCTTCTCTGGGTGGCAAGTTACACCCCGAAGGACATTTTATGACATCCTCGCACATTGATTCATTATCACAGAAGCAACAATCAATGTATAATTTTCAGTGTTCTGTACCTGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCACCGTTTGGTGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAAGTATTTTTAGACAGGAAAATGAAATAATCCATGGTAACAATTATGCTTCTTCTAGATTGAACCATACTACTGTAAATGGGGAGAGTGATGGTGGGGTTGGATCAAGACATTCGGCATCTGCATCAAAATCAGGTAGATCTCTTGGTCAGATTTTACCTAGATCTGGTGGTGACCAATATGATCCACTTTTTGACAGCATTGAACCATCATCCTCTCTGAGAAAAATTGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCAACGTCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGATGTGGATGAGAAAAACAAGCAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAGACAGCAGATGCAGAAGTTGGTGATATTGAAAATGAGAGCCTAAGTGATGATGTGGATGTTGCAAAAATGTCTACAGAGGAGGTTGAGATTAATCGGGTCAAGTCTCCGGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCGATGAAATTGTTCAAAGTTTCCATTGCGAATTTTGTAAAGGAAGTTTTAAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTTGCTTTCAAAACCATTGTGAAGAAGACCGTGGATAAAGTGTCAGGAGCCATGAAAGGCCACCGTATACCTAAGTCCCAAGCGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTGAAGGTATGA 3486 0.4102 MGVSKQNEGPEILSDLEHRKSVRPVTKVCSPENNSTEVAELSLSTALEKAAACVNDLVCNVTSDHNETTTTNRDYGPLLASGSPIRLLQDYASDDTSANDTFSGGAYTGVSVVHKDSGSHMEVGIGSKSSTSTQKGFGSVSITSRDDSEISPHLLPESKKTRNRKKFVSRWSNDGCIEHNLENQMSVNFASSIEAFKGKDRLQDTAIDTDSKSGNAEKEDEGKTSKFEPNVMKVDEFGRQLREGLSDSDSDDSCLHRTRRLNKRDRSWSRSRSPPDRRSRRNRRSPRRRRDKRNRSRSWSPRHRRSSRSPISRRPGDFRGENIKRDKDQCLDFLRGKCYRGASCRYIHHESDMNATSRHYKNKHDLEVSYYEKESKTNGDMTNISSKVFDNELDGVRSRDVDLSLNVTSQEVVQKKEDSGKNVVASIIHLDGQSVNSNPGKSKSIREVSPEMQETIVVREDSKNSIHENDGSEAGDSQQQHMVEGFHPDALGCDNTSKSSGTYKDIPSGDGLFVQKMPLSVSSVGIQEHSGYPSQHVNASSVTDTSHDNRSTVSTIVNEVPGNVISEQASLHPQASKELPPQFGSSVEFPHHNYQLTASVVSHSPGENPVHMPQISRQYDVMQQSAFFPFQSTTREKFEPYPPPLHMQNAHFNVPPNSSWTSLPLPPPPLPPPPPPRVVYDPSVNSGVVKSYISSEFIQNQLQSRTEIVSQTSMKPLPTSSQNSEFQDLGYPPMQDHSRTFMLAEPFSPKQLPHGNPASQLLSGSSLNRDEFHNQLPRQDSKFSSTTSFGSLQPQQNQFSWKSDVNRQQPSLGGKLHPEGHFMTSSHIDSLSQKQQSMYNFQCSVPEANLGVPGETATVSRYPPDFLDSNHSTSLPPFGGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIIHGNNYASSRLNHTTVNGESDGGVGSRHSASASKSGRSLGQILPRSGGDQYDPLFDSIEPSSSLRKIDFDQKQEVTGESNVSLRPKSSYMSLDVDEKNKQEEVGAVASTTSQNNDEYGETADAEVGDIENESLSDDVDVAKMSTEEVEINRVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRIPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03379 1161 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 55 1160 - -
Phac9g03379 1161 Gene3D - 324 379 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 778 817 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 530 550 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 1016 1031 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 121 166 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 150 166 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 924 966 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 459 478 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 204 259 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 123 148 - -
Phac9g03379 1161 ProSiteProfiles Zinc finger C3H1-type profile. 324 351 IPR000571 GO:0046872
Phac9g03379 1161 MobiDBLite consensus disorder prediction 276 309 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 778 810 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 1010 1033 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 204 322 - -
Phac9g03379 1161 MobiDBLite consensus disorder prediction 924 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03379 Phac-Chr9 33238351 33250769 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac9g03379 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03379 - - vum:124822814 1826.6