Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03377 ATGTATAGTCAAGTGAATCGTGGTTCTCATTTCGGGCAGAGTCCTGCCCCTCCGGTGCTGCCGCCTCCACCACCACCACCACCACAGCAGTATCAGCAGGCTCCGCCACATTTCCATCGGTTCCCACCACCTAACGTTGGTGGTCCTCCTCCTCCACCACCGCCTAACATTGGTGGTCCACCCCCACCACCACCACCTCATCATATTTATTTAAATGGACCTCCTCCTCCTCCTCCACCACCGCTTCCTAATTCGTCTTCCTTAGTTCCCATGAACCTTCCGGTTCAAGGTTCACTTAATGTAAGGCCAAATGCAGGACAATCCTATGCTATCCCTTCTCAATTACACCATGGGAACACCATGGCGCCACAAGCATCATGGGCTCCAGGGCCACCGGCTAGAGTATTGCCACCACCACCTCCACCCCATCCTCCCTCGGCTTCTCAAGGTCAAATTTTGTATAACACCCCTTTCCATCGTCCACCTCTGCAGCCCGGTGATGTTCAGAATCTGCATAATGCTCCTCCTCCACCACCCCCTTCACCAGGTTATTTCCATTCAACTATTGGGAATTACCAAGTGCCTCCTGTTATTCCCCCACCTTTGCCGTCGTCTCCACCACCTGCTCTTCCGGCTCCACCGCCTCCTCCTCTTAATGCTCCGGTAACCTCCTCCTCCTCATCAAATGCTGCACGCACTGATGACCTTCACCCTGTGAAGGTTTCTGGGTTAGAATCAAAGACTGTGGATTCGGTTGACGGAGTTGTAGTTTCTCTTCCGTCTGGTATTGTACCTGTACATGGTTCTGATTCTAATTGGGATGGTCCAAGTTGTAGAGAGGTTGCTGGTGCTGAAAAAGATGAGGATCTTCCCCCACCTAAGCCAACGGAAGAAAATACTATATTGAAGATAGAAGCTTTGTGTCAGCTTATTTCTGAGAAGGGTGCTGATATTGAAGATAGGATTCGTCAAGATGAATTTCAAAATCCTGAATATGAATTTTTGTTTGGCGGAGACCCAGGAACGGAGGCTGGAATTTCTTACACTTATTTCCTGTGGATGAAGAAGAAATATAATTTAGATACTGGATGGCATGAAAAGAAAAGGCAACCAGAGAGAGTATATTCTTCAGGTGAGCAGTATAACCTGCATGTTGCAACTGCGGGTGCTGATTCTGACATGGAAATGGAAGATGATATCACACTTTCTGACAAGGACCAAGGTTCAAACTATGCAACTGAAGCCCATACTCACCAACATAATCGGGATGATGAAGTGTTTAGTGTGAATCAGAATATAGGGCAGCTGCAGACATTATCAGAGAATGACCCTGCCAGGGACATCTCATCCTGCTGTCCATCATACTTTGGGTCCATGGGAGTCAGCAAGCAGAATGAAGGACCAGAGATTTTATCTGATCTGGAGCACAGGAAATCTGTAAGACCAGTTACCAAGGTTTGTAGTCCTGAGAATAACTCCACTGAAGTGGCTGAGTTATCCTTGAGCACAGCTTTGGAGAAAGCTGCTGCTTGTGTTAATGATTTGGTATGTAATGTTACTTCGGATCACAATGAAACCACTACTACTAATAGGGATTATGGGCCACTCCTAGCGAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGCTAATGACACATTCTCAGGAGGTGCTTATACTGGTGTTTCAGTTGTCCATAAAGATTCTGGGAGTCATATGGAAGTTGGTATTGGATCTAAGAGTTCCACCAGTACTCAAAAGGGTTTTGGGTCAGTCTCCATAACATCACGGGATGATTCAGAAATATCTCCACATTTATTACCAGAGTCTAAGAAAACTCGGAACCGAAAAAAATTTGTCTCACGTTGGAGTAATGATGGATGTATTGAGCACAACCTTGAAAACCAGATGTCTGTTAATTTTGCTTCTTCGATAGAAGCTTTCAAGGGCAAAGATAGATTACAGGATACTGCCATTGACACTGATAGTAAAAGTGGTAATGCTGAAAAGGAAGATGAGGGGAAAACCTCAAAATTTGAACCAAATGTTATGAAAGTAGATGAATTCGGAAGACAACTAAGAGAAGGTCTTTCAGATAGTGATTCTGATGATTCATGCCTTCACCGGACAAGGAGGCTAAATAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGACAGGAGGAGTAGGAGGAATAGGAGGAGTCCTCGGAGGAGAAGAGATAAAAGAAACAGGTCTCGCAGCTGGTCACCCCGGCATCGAAGAAGCAGTAGGTCTCCAATCTCAAGACGTCCTGGTGACTTTCGTGGTGAGAATATTAAAAGGGACAAGGATCAGTGCTTGGACTTTCTTCGAGGTAAGTGCTATCGAGGAGCATCTTGCAGGTACATTCACCATGAATCTGATATGAATGCTACTTCAAGGCACTATAAGAATAAACATGATTTGGAAGTCAGTTATTATGAAAAAGAATCCAAGACTAATGGAGACATGACGAATATTTCTTCTAAAGTGTTTGATAATGAGCTTGATGGAGTTAGAAGTCGGGATGTGGATCTTAGTTTGAATGTGACTAGCCAGGAAGTAGTGCAGAAAAAAGAAGATTCAGGGAAGAATGTTGTTGCATCAATCATTCATCTTGATGGTCAATCAGTTAATAGCAATCCAGGTAAATCTAAATCTATCAGAGAGGTTTCTCCTGAAATGCAGGAAACCATTGTAGTCAGGGAGGATAGTAAGAATTCAATCCATGAGAATGATGGTTCGGAAGCAGGTGATTCTCAACAGCAACACATGGTTGAAGGCTTTCACCCTGATGCTTTAGGCTGTGATAATACTTCTAAATCATCTGGTACATATAAAGATATTCCCTCAGGAGATGGTCTATTTGTTCAGAAAATGCCACTCAGTGTTTCTTCTGTTGGAATTCAGGAACATTCTGGTTACCCATCTCAGCATGTAAATGCATCCTCTGTGACTGATACATCACATGATAATAGATCAACTGTTTCTACTATTGTTAATGAAGTTCCTGGCAATGTCATATCAGAGCAGGCTTCATTGCACCCTCAGGCTTCAAAAGAGTTACCTCCACAATTTGGCTCTTCAGTGGAATTTCCACATCATAATTACCAGTTGACTGCATCTGTTGTTTCACATTCCCCAGGTGAAAATCCTGTGCATATGCCACAAATTTCAAGGCAGTATGATGTGATGCAACAAAGTGCATTCTTTCCTTTCCAATCCACTACCAGAGAAAAGTTTGAACCTTACCCACCTCCTTTACACATGCAGAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCCTTGCCACTGCCACCGCCACCACTGCCACCGCCACCACCACCAAGAGTGGTGTATGATCCCAGTGTAAACTCAGGAGTTGTAAAATCATATATTTCTTCTGAATTCATTCAGAATCAATTGCAGTCAAGAACTGAAATTGTTTCCCAGACTTCCATGAAACCTTTACCAACTAGTTCTCAGAATTCTGAATTTCAGGATCTAGGATACCCTCCAATGCAGGATCATTCACGAACTTTCATGCTTGCTGAACCTTTCTCTCCAAAGCAACTTCCTCATGGGAACCCAGCTAGTCAATTGCTTTCAGGATCTAGTCTCAATAGAGATGAATTTCATAATCAACTTCCAAGGCAGGATTCAAAATTTTCCAGTACCACATCGTTTGGCAGCCTGCAGCCTCAACAAAATCAATTTTCCTGGAAATCGGATGTGAACAGACAACAACCTTCTCTGGGTGGCAAGTTACACCCCGAAGGACATTTTATGACATCCTCGCACATTGATTCATTATCACAGAAGCAACAATCAATGTATAATTTTCAGTGTTCTGTACCTGAGGCTAATTTGGGTGTGCCTGGGGAGACTGCTACTGTTTCCAGATATCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCACCGTTTGGTGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAAGTTCCAAATTCAGTTCAAGTATTTTTAGACAGGAAAATGAAATAATCCATGGTAACAATTATGCTTCTTCTAGATTGAACCATACTACTGTAAATGGGGAGAGTGATGGTGGGGTTGGATCAAGACATTCGGCATCTGCATCAAAATCAGGTAGATCTCTTGGTCAGATTTTACCTAGATCTGGTGGTGACCAATATGATCCACTTTTTGACAGCATTGAACCATCATCCTCTCTGAGAAAAATTGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCAACGTCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGATGTGGATGAGAAAAACAAGCAGGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAGACAGCAGATGCAGAAGTTGGTGATATTGAAAATGAGAGCCTAAGTGATGATGTGGATGTTGCAAAAATGTCTACAGAGGAGGTTGAGATTAATCGGGTCAAGTCTCCGGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCGATGAAATTGTTCAAAGTTTCCATTGCGAATTTTGTAAAGGAAGTTTTAAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTTGCTTTCAAAACCATTGTGAAGAAGACCGTGGATAAAGTGTCAGGAGCCATGAAAGGCCACCGTATACCTAAGTCCCAAGCGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTGAAGGTATGA 4860 0.4309 MYSQVNRGSHFGQSPAPPVLPPPPPPPPQQYQQAPPHFHRFPPPNVGGPPPPPPPNIGGPPPPPPPHHIYLNGPPPPPPPPLPNSSSLVPMNLPVQGSLNVRPNAGQSYAIPSQLHHGNTMAPQASWAPGPPARVLPPPPPPHPPSASQGQILYNTPFHRPPLQPGDVQNLHNAPPPPPPSPGYFHSTIGNYQVPPVIPPPLPSSPPPALPAPPPPPLNAPVTSSSSSNAARTDDLHPVKVSGLESKTVDSVDGVVVSLPSGIVPVHGSDSNWDGPSCREVAGAEKDEDLPPPKPTEENTILKIEALCQLISEKGADIEDRIRQDEFQNPEYEFLFGGDPGTEAGISYTYFLWMKKKYNLDTGWHEKKRQPERVYSSGEQYNLHVATAGADSDMEMEDDITLSDKDQGSNYATEAHTHQHNRDDEVFSVNQNIGQLQTLSENDPARDISSCCPSYFGSMGVSKQNEGPEILSDLEHRKSVRPVTKVCSPENNSTEVAELSLSTALEKAAACVNDLVCNVTSDHNETTTTNRDYGPLLASGSPIRLLQDYASDDTSANDTFSGGAYTGVSVVHKDSGSHMEVGIGSKSSTSTQKGFGSVSITSRDDSEISPHLLPESKKTRNRKKFVSRWSNDGCIEHNLENQMSVNFASSIEAFKGKDRLQDTAIDTDSKSGNAEKEDEGKTSKFEPNVMKVDEFGRQLREGLSDSDSDDSCLHRTRRLNKRDRSWSRSRSPPDRRSRRNRRSPRRRRDKRNRSRSWSPRHRRSSRSPISRRPGDFRGENIKRDKDQCLDFLRGKCYRGASCRYIHHESDMNATSRHYKNKHDLEVSYYEKESKTNGDMTNISSKVFDNELDGVRSRDVDLSLNVTSQEVVQKKEDSGKNVVASIIHLDGQSVNSNPGKSKSIREVSPEMQETIVVREDSKNSIHENDGSEAGDSQQQHMVEGFHPDALGCDNTSKSSGTYKDIPSGDGLFVQKMPLSVSSVGIQEHSGYPSQHVNASSVTDTSHDNRSTVSTIVNEVPGNVISEQASLHPQASKELPPQFGSSVEFPHHNYQLTASVVSHSPGENPVHMPQISRQYDVMQQSAFFPFQSTTREKFEPYPPPLHMQNAHFNVPPNSSWTSLPLPPPPLPPPPPPRVVYDPSVNSGVVKSYISSEFIQNQLQSRTEIVSQTSMKPLPTSSQNSEFQDLGYPPMQDHSRTFMLAEPFSPKQLPHGNPASQLLSGSSLNRDEFHNQLPRQDSKFSSTTSFGSLQPQQNQFSWKSDVNRQQPSLGGKLHPEGHFMTSSHIDSLSQKQQSMYNFQCSVPEANLGVPGETATVSRYPPDFLDSNHSTSLPPFGGSRISAHYNPYASTFEKPLSSKFSSSIFRQENEIIHGNNYASSRLNHTTVNGESDGGVGSRHSASASKSGRSLGQILPRSGGDQYDPLFDSIEPSSSLRKIDFDQKQEVTGESNVSLRPKSSYMSLDVDEKNKQEEVGAVASTTSQNNDEYGETADAEVGDIENESLSDDVDVAKMSTEEVEINRVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRIPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV* 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03377 1619 Gene3D - 782 837 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 662 780 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1 234 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 608 624 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 579 624 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1382 1424 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 88 121 - -
Phac9g03377 1619 ProSiteProfiles Zinc finger C3H1-type profile. 782 809 IPR000571 GO:0046872
Phac9g03377 1619 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 315 1618 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 988 1008 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1468 1491 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 130 147 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 662 717 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 917 936 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 194 221 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 581 606 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 734 767 - -
Phac9g03377 1619 Gene3D Surp module 303 359 IPR035967 GO:0003723|GO:0006396
Phac9g03377 1619 SUPERFAMILY Surp module (SWAP domain) 289 357 IPR035967 GO:0003723|GO:0006396
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1236 1268 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1382 1411 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 15 87 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1236 1276 - -
Phac9g03377 1619 MobiDBLite consensus disorder prediction 1474 1489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03377 Phac-Chr9 33238351 33250769 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phac9g03377 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03377 - - vum:124822814 2347.39