Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03341 ATGCAATCTCAAACTTCAGATACGCTTCACTCTCACTATGGGAATGAACCAATTTCCTATTATGACCCATCATTTTACTACACCAGGCCCTTTTCCATTGACTCTGAAAGCAACCCAATATCAAAACAAGAAAACAACCCTGACCTTCCTCCTTTGTCCTTTTTCCACTTTCCTTCTCCTCCCTTTGAAGATGTTCAAATTTTCCTCGAACAACACCACGATTTCCTCCTTCAGTTTCACCATAAACCTCTACCTCAAGACCCCGAGCCTCAACCAGTTAGTATTGCCCTGGAGACTTCTGCTAAAAAGAGTAATCAGATCCCCAGAAAAAGACTCGGCAAGAGAGATAGACACAGCAAGATTAACACTGCAAGAGGACTGAGGGATAGGAGAATGAGACTTTCCCTTGATGTTGCAAAGAGGTTTTTCGGCTTGCAAGATATGCTAGGCTTTGAGAAAGCTAGCAAGACCGTGGAGTGGCTAATGAACCAAGCAAAAGTTGAAATCAATCGTCTAGCGAAGGAGAAAAGGAAGCAGAAGAAGAATGTTCACCACAGTTGCAGCAGTGTTAGTTCGGAATGTGAAGAAGGGGTATCTAGTGTTGATGAGGTTGTAGTGAGTAGAGATGAAGAACAAGCAGGAGAAGAGAGAGTGGAGAAAGTGATGAAGAGAAGGGTTAACCTTTCTAGGAAGATCAGTGCATTCCATCCTCTTGCAAAGGAGTGCAGGGAAAGGGCAAGAGAGAGGGCAAGAGAGAGGACAAGAGAAAAGATCAGAAGTCGTGGCCTAGCTCAAGAATCAAAGCCATGTAGAGAAGAAACAAATCAAAATCTGATCCAATTGGGTTCCTGGAACCCCTCGGAAGCTGGACAAGAATTTGGTACCAAGAGCCATATTGTGCATCCTTCCTTCAACGTGCTCACTGAGGGTAAACAACAATCCTACTACCCAAAGGAGCATGACGATGATTCTTTGGTTATTTTGAGCAAATGGAGCCCCTCCTTGATCTTCAATGAACACCAATTTGCAGAGTTTCAGTCCTTGGGAAAACCTTGGGAGGCCTAA 1065 0.4404 MQSQTSDTLHSHYGNEPISYYDPSFYYTRPFSIDSESNPISKQENNPDLPPLSFFHFPSPPFEDVQIFLEQHHDFLLQFHHKPLPQDPEPQPVSIALETSAKKSNQIPRKRLGKRDRHSKINTARGLRDRRMRLSLDVAKRFFGLQDMLGFEKASKTVEWLMNQAKVEINRLAKEKRKQKKNVHHSCSSVSSECEEGVSSVDEVVVSRDEEQAGEERVEKVMKRRVNLSRKISAFHPLAKECRERARERARERTREKIRSRGLAQESKPCREETNQNLIQLGSWNPSEAGQEFGTKSHIVHPSFNVLTEGKQQSYYPKEHDDDSLVILSKWSPSLIFNEHQFAEFQSLGKPWEA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03341 354 Coils Coil 162 182 - -
Phac9g03341 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 103 317 IPR005333 GO:0003700
Phac9g03341 354 Pfam TCP family transcription factor 113 260 IPR017887 -
Phac9g03341 354 ProSiteProfiles R domain profile. 240 257 IPR017888 -
Phac9g03341 354 MobiDBLite consensus disorder prediction 247 268 - -
Phac9g03341 354 ProSiteProfiles TCP domain profile. 114 172 IPR017887 -
Phac9g03341 354 MobiDBLite consensus disorder prediction 247 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03341 Phac-Chr9 32921044 32923284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03341 39 254 TCP Transcription Factor Family AT3G18550 38.934 1.08e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac9g03341 TCP 2.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03341 - - pvu:PHAVU_009G200600g 618.616