Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03329 ATGGCATCTCAAGCAGAACCTAGCATCGATTACAAGCCCTACAGCTACTCCACACTGCTGAAATCCTTTGCAGACCAAACTGATCAGACCTACAAGCTCGAAGACTTTCTTTCTCGCTTAGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGTGAGCTTCCTCTCTGCATGCAACTCCTCACCAACGCTGTGGAGGCTTCAAGGCAGCAACTACAGGCATTCAGATCAAACCAAGGCACAAGGCCAGTTCTGGAAGAATTCATACCCATAAAGTATCCAAACTCTCAAGAAAGCACTGAGAAGGCATCAAACCTATCAGACAAGGCGAATTGGATGACATCAGCTCAATTATGGAGCCAAGCAAGCGAAGGAACCAAACCAAAATCCACAATTACATCACCAAAAGAAAGTGCTGATACAGGGTTTAGCGTGAGCCCTAAGCTAGCCTTAGACAACAAACATAGGAATGGAGGAGCCTTTTTACCATTCTCAAAAGAGCGAAACTCATGCCAAGGAGTAGGGGGACTTCCTGAGTTAGCCCTTGCCTCTTCTGAGAATGAAATGGAGGTGAAGAACTGTGAAGAAACAGAGAAATGTTCCAAAAGGGAGAATTCAGGTAAAGGAAGGAGTTGTGAAGGAATTGTTGATCAGGGAAAAAGTGCTGCAACTGCAGCTGAGTCACAAACAACTCATACTACAACCACCACAACTAACACTACTGGCCAAACTCATAGGAAAGCAAGAAGATGTTGGTCACCGGACTTGCACCGTCGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACTCCAAAACAGATCAGGGAATTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCCAGCCCAAGCCTACATGCAGGAGCACCAACACCACAACTTGTAGTGCTGGGAGGAATTTGGGTGCCACCGGAATATGCCACTGCTCCGGCACACTCTGGTGGCCCCAGCCTCTATGGCCCACATCCTACCTCACATATGCCACCGCCACACTACTGTGCAGGCACCCCTGTGTCCCAAGAGTTCTACAACTTAGCTCCATCACTATCGTTGCCACCACCACAAGACCACACTCTCCATCACCATTTTCACATGTACAAGACAGCACCACAGACCCAAAGTTCTTCAGAATCAGATGTTCGGAGCGGTGGCGGGCGATCTGAGAGCATTGAGGATGGGAAGTCGGAGAGTGGTAGCTGGAAAGGAGAGAATGGAGAGAGGAAAGGGTTGGCAGCACTAAGAGATCAAGAAGGGGAAGACAGCACTGGGAGTGAGATCACTCTTAGATTCTAG 1368 0.4773 MASQAEPSIDYKPYSYSTLLKSFADQTDQTYKLEDFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASRQQLQAFRSNQGTRPVLEEFIPIKYPNSQESTEKASNLSDKANWMTSAQLWSQASEGTKPKSTITSPKESADTGFSVSPKLALDNKHRNGGAFLPFSKERNSCQGVGGLPELALASSENEMEVKNCEETEKCSKRENSGKGRSCEGIVDQGKSAATAAESQTTHTTTTTTNTTGQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSLHAGAPTPQLVVLGGIWVPPEYATAPAHSGGPSLYGPHPTSHMPPPHYCAGTPVSQEFYNLAPSLSLPPPQDHTLHHHFHMYKTAPQTQSSSESDVRSGGGRSESIEDGKSESGSWKGENGERKGLAALRDQEGEDSTGSEITLRF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03329 455 SUPERFAMILY Homeodomain-like 244 305 IPR009057 -
Phac9g03329 455 MobiDBLite consensus disorder prediction 223 247 - -
Phac9g03329 455 NCBIfam myb-like DNA-binding domain, SHAQKYF class 247 302 IPR006447 GO:0003677
Phac9g03329 455 Coils Coil 33 53 - -
Phac9g03329 455 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 304 IPR017930 -
Phac9g03329 455 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Phac9g03329 455 MobiDBLite consensus disorder prediction 392 455 - -
Phac9g03329 455 Gene3D - 246 304 - -
Phac9g03329 455 MobiDBLite consensus disorder prediction 392 408 - -
Phac9g03329 455 MobiDBLite consensus disorder prediction 120 143 - -
Phac9g03329 455 MobiDBLite consensus disorder prediction 223 248 - -
Phac9g03329 455 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 426 IPR044787 GO:0003700|GO:0006355
Phac9g03329 455 FunFam Myb family transcription factor 246 304 - -
Phac9g03329 455 MobiDBLite consensus disorder prediction 120 141 - -
Phac9g03329 455 MobiDBLite consensus disorder prediction 409 449 - -
Phac9g03329 455 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03329 Phac-Chr9 32784405 32787332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03329 1 455 G2-like Transcription Factor Family AT2G03500 51.883 1.28e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac9g03329 Myb_DNA-binding 9.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03329 - - gmx:100815048 758.829