Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03328 ATGACATCAGCTCAATTATGGAGCCAAGCAAGCGAAGGAACCAAACCAAAATCCACAATTACATCACCAAAAGAAAGTGCTGATACAGGGTTTAGCGTGAGCCCTAAGCTAGCCTTAGACAACAAACATAGGAATGGAGGAGCCTTTTTACCATTCTCAAAAGAGCGAAACTCATGCCAAGGAGTAGGGGGACTTCCTGAGTTAGCCCTTGCCTCTTCTGAGAATGAAATGGAGGTGAAGAACTGTGAAGAAACAGAGAAATGTTCCAAAAGGGAGAATTCAGGTAAAGGAAGGAGTTGTGAAGGAATTGTTGATCAGGGAAAAAGTGCTGCAACTGCAGCTGAGTCACAAACAACTCATACTACAACCACCACAACTAACACTACTGGCCAAACTCATAGGAAAGCAAGAAGATGTTGGTCACCGGACTTGCACCGTCGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACTCCAAAACAGATCAGGGAATTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCCAGCCCAAGCCTACATGCAGGAGCACCAACACCACAACTTGTAGTGCTGGGAGGAATTTGGGTGCCACCGGAATATGCCACTGCTCCGGCACACTCTGGTGGCCCCAGCCTCTATGGCCCACATCCTACCTCACATATGCCACCGCCACACTACTGTGCAGGCACCCCTGTGTCCCAAGAGTTCTACAACTTAGCTCCATCACTATCGTTGCCACCACCACAAGACCACACTCTCCATCACCATTTTCACATGTACAAGACAGCACCACAGACCCAAAGTTCTTCAGAATCAGATGTTCGGAGCGGTGGCGGGCGATCTGAGAGCATTGAGGATGGGAAGTCGGAGAGTGGTAGCTGGAAAGGAGAGAATGGAGAGAGGAAAGGGTTGGCAGCACTAAGAGATCAAGAAGGGGAAGACAGCACTGGGAGTGAGATCACTCTTAGATTCTAG 1032 0.4797 MTSAQLWSQASEGTKPKSTITSPKESADTGFSVSPKLALDNKHRNGGAFLPFSKERNSCQGVGGLPELALASSENEMEVKNCEETEKCSKRENSGKGRSCEGIVDQGKSAATAAESQTTHTTTTTTNTTGQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSLHAGAPTPQLVVLGGIWVPPEYATAPAHSGGPSLYGPHPTSHMPPPHYCAGTPVSQEFYNLAPSLSLPPPQDHTLHHHFHMYKTAPQTQSSSESDVRSGGGRSESIEDGKSESGSWKGENGERKGLAALRDQEGEDSTGSEITLRF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03328 343 Pfam Myb-like DNA-binding domain 137 188 IPR001005 -
Phac9g03328 343 SUPERFAMILY Homeodomain-like 132 193 IPR009057 -
Phac9g03328 343 MobiDBLite consensus disorder prediction 111 136 - -
Phac9g03328 343 MobiDBLite consensus disorder prediction 111 135 - -
Phac9g03328 343 MobiDBLite consensus disorder prediction 1 29 - -
Phac9g03328 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 135 190 IPR006447 GO:0003677
Phac9g03328 343 FunFam Myb family transcription factor 134 192 - -
Phac9g03328 343 MobiDBLite consensus disorder prediction 280 296 - -
Phac9g03328 343 MobiDBLite consensus disorder prediction 1 58 - -
Phac9g03328 343 MobiDBLite consensus disorder prediction 280 343 - -
Phac9g03328 343 Gene3D - 134 192 - -
Phac9g03328 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 192 IPR017930 -
Phac9g03328 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 314 IPR044787 GO:0003700|GO:0006355
Phac9g03328 343 MobiDBLite consensus disorder prediction 297 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03328 Phac-Chr9 32784405 32787332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03328 1 343 G2-like Transcription Factor Family AT2G03500 48.876 7.63e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac9g03328 Myb_DNA-binding 6.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03328 - - gmx:100815048 567