Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03311 ATGGACGGAAGGAGAGAGAATATAATCGCTGCTATATCAGTGATTACACTGGTTATCCTCATAGTTATTGCTCGTGTCGCGTTGAAGCTCTCAAAGCCCTTCTTCCTTATTTTTGGTGCCGGTGTTGCTGTCATTCTTGCAGTCTTTGCTTATATACTCCTAAGCAGAAGGTACAACCGCAGGAGGAGGCTACTGGAGTCACAGTTGAAATCTGAAGGCCAAGAACTTCGCATAGAGTACAGTTTCTTGAAGAAAGTTGCGGGGGTTCCCATTAAGTTCAGATACAAGGAGCTTGAGGAAGCCACTGATGGGTTTCAGGCACTGATTGGAAAAGGTGCTTCTGCTTCAGTTTTCAAAGGTATTCTCGATGATGGCACTTCAGTTGCCGTGAAACGAATCGATGGAGAGGAAAGAGGGGAGAGGGAGTTCAGATCAGAGGTTGCAGCCATAGCTAGTGTGCATCATGTGAACCTTGTGAGGCTATTGGGCTACTGTAATGCTCCAATAGCACCTAGGTACCTTGTTTATGAATATGTCTCAAATGGAGGGTACTTGGCACCTGAGTGGCTCTTAGAGCAAGGTATTTCCGATAAGACTGACATATATAGTTATGGGATGGTTCTCTTGGAGATTGTTGGAGGCAGGAAAAACGTCTCCTACATGGATGATGAAAAGGCCAAGTCAAAACGAAAATGGCAGTACTTTCCAAAGATTGTGAATGAGAAAGTGAGGGAAGGTAAACTCATGGAAATTGTTGATCATAGGTTGTTGGAAGGTGGGGGTGTTGATGAGAGGCAGGTAAAGACACTGGTTTATGTTGCTTTGTGGTGTGTGCAAGAGAAGCCAAGATCAAGGCCTAGCATGGCCCAAGTTGTTGATATGCTTGAAGGGCGTGTGAGGGTAGAACTGCCACCTGATACTAGAATGGTTCTTGTTGATTTTCTGTGTGTGGATGATAGTGCAACAGATAGCAGTAGCATGCCAAGGGTGGGCTTTGTGTCGAATCAAAGAGCACAAAGCGATGTAGAGTGTTCATCAACCTACTCTCTTGCTACCACTGTTTTGTCCGGAAGATAA 1077 0.4503 MDGRRENIIAAISVITLVILIVIARVALKLSKPFFLIFGAGVAVILAVFAYILLSRRYNRRRRLLESQLKSEGQELRIEYSFLKKVAGVPIKFRYKELEEATDGFQALIGKGASASVFKGILDDGTSVAVKRIDGEERGEREFRSEVAAIASVHHVNLVRLLGYCNAPIAPRYLVYEYVSNGGYLAPEWLLEQGISDKTDIYSYGMVLLEIVGGRKNVSYMDDEKAKSKRKWQYFPKIVNEKVREGKLMEIVDHRLLEGGGVDERQVKTLVYVALWCVQEKPRSRPSMAQVVDMLEGRVRVELPPDTRMVLVDFLCVDDSATDSSSMPRVGFVSNQRAQSDVECSSTYSLATTVLSGR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03311 358 Pfam Protein tyrosine and serine/threonine kinase 106 182 IPR001245 GO:0004672|GO:0006468
Phac9g03311 358 ProSiteProfiles Protein kinase domain profile. 103 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03311 358 Gene3D Phosphorylase Kinase; domain 1 66 173 - -
Phac9g03311 358 Pfam Protein kinase domain 183 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03311 358 Gene3D Transferase(Phosphotransferase) domain 1 174 298 - -
Phac9g03311 358 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Phac9g03311 358 PANTHER OS07G0415500 PROTEIN 43 182 - -
Phac9g03311 358 FunFam Putative receptor-like protein kinase 70 178 - -
Phac9g03311 358 SUPERFAMILY Protein kinase-like (PK-like) 93 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03311 Phac-Chr9 32597820 32599172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03311 183 307 Receptor kinase-like Gene Family AT5G20050 60.800 7.58e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phac9g03311 Pkinase 9.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03311 - - vra:106757544 315.464