Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03305 ATGTCTTCCATGGCATCCACGACCCGAGACGAATCCTCCGACAACGACAGCAACTGCTCCTCGGTAACCGCACCGGACTCCTCCCGCACCTGGCTCACCACCTTTAGCTTCCGCCGCTCCAACCGCAGCTCCTTCTCCCTCTCCCCCGCCCAGACCACCTCAAGAGCTGCATGCGAGGCCATGCGCCGCCTCCGCCTCCAAACCGGCGCCATCGGCCTCGACCACTTCCGCCTTCTGCGGCGGCTCGGCAGCGGCGACATCGGGAACGTGTACCTCTGCCAGATACGGAACCCGGCGGTGGGGTTGGCGCAGTGCCTCTACGCCATGAAGGTGGTGGATAGAGAGGCGCTGAGCATACGGAAGAAGCTACACCGAGCGGAGATGGAGAAGGAGATTCTGGCCATGATGGATCACCCCTTCTTGCCTACCCTATACGCTGCGTTTGATGCCTCTCATTACTCTTGCTTCGTCATGGACTTTTGCCCCGGCGGAGACTTGTTCTCCGCTCGCCAACGCCTCCCCGGAAAACGCTTTACCATCTCATCCACTAAGTTTTATGCAGCAGAGACACTTGTGGCACTAGAGTATCTCCACATGAAGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTGGTAAGGGAAGACGGTCACATTATGCTTTCGGATTTTGATCTGTGTCTGAGATGCGATGTCGTTCCAAAGCTTTTGAGAAGCAAAACCAGATCAGAACGCAGCATCAAGACACGAACATCTTCTTGTGCTGCCCCCATGCAATCCTGTTTCTCTGCCTCAAGCAAGAGAAAGAAGGTGACAACAGTTATAAGGGAAAATGTGGAGGTGTGTGAACTTGACACAGAGGTGGTGGCAGAGCCCATCAATGCAAGGTCCAAGTCATTTGTGGGAACCCATGAGTACTTGGCACCAGAAGTGATTTCTGGTCAAGGACATGGTAGTGCAGTGGATTGGTGGACTTTTGGAGTTTTCTTGTATGAAATGTTATATGGGAGAACACCCTTCAAAGGTGAGAACAATGAGAAAACACTCACCAACATTCTCAAGCAGCCCTTGTCTTTCCCTAGAATTGCAGTGAGTAGCAGCAAGGAGTACGAAGAGATGGTGAAGGTTCAAGACCTCATCAGCAAGCTCTTGGTGAAGAACCCAAAGAAGAGAATTGGGTGCTGCATGGGGTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAGGGAGTGAACTGGGCTCTAATTAGATCAGTTAGGCCACCTGAGTTCCCTACTGATTTGAACAAGATTAGGAGTAGAGTTTTGTTACAGAAACTAAGCAAGAAAGACAAGGATCAACCGTTTCAGATTACTCATCATTTTGACTACTTCTGA 1377 0.5134 MSSMASTTRDESSDNDSNCSSVTAPDSSRTWLTTFSFRRSNRSSFSLSPAQTTSRAACEAMRRLRLQTGAIGLDHFRLLRRLGSGDIGNVYLCQIRNPAVGLAQCLYAMKVVDREALSIRKKLHRAEMEKEILAMMDHPFLPTLYAAFDASHYSCFVMDFCPGGDLFSARQRLPGKRFTISSTKFYAAETLVALEYLHMKGIVYRDLKPENVLVREDGHIMLSDFDLCLRCDVVPKLLRSKTRSERSIKTRTSSCAAPMQSCFSASSKRKKVTTVIRENVEVCELDTEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLTNILKQPLSFPRIAVSSSKEYEEMVKVQDLISKLLVKNPKKRIGCCMGSVEIKRHEFFKGVNWALIRSVRPPEFPTDLNKIRSRVLLQKLSKKDKDQPFQITHHFDYF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03305 458 Pfam Protein kinase domain 298 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03305 458 Pfam Protein kinase domain 77 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03305 458 SUPERFAMILY Protein kinase-like (PK-like) 60 430 IPR011009 -
Phac9g03305 458 CDD STKc_phototropin_like 74 426 - -
Phac9g03305 458 FunFam serine/threonine-protein kinase D6PK-like 296 426 - -
Phac9g03305 458 FunFam protein kinase PINOID 2 74 160 - -
Phac9g03305 458 MobiDBLite consensus disorder prediction 1 26 - -
Phac9g03305 458 Gene3D Transferase(Phosphotransferase) domain 1 295 424 - -
Phac9g03305 458 Gene3D Transferase(Phosphotransferase) domain 1 161 230 - -
Phac9g03305 458 SMART serkin_6 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03305 458 FunFam Serine/threonine-protein kinase OXI1 165 233 - -
Phac9g03305 458 Gene3D Phosphorylase Kinase; domain 1 74 160 - -
Phac9g03305 458 ProSiteProfiles Protein kinase domain profile. 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03305 458 PANTHER FLIPPASE KINASE 1-RELATED 13 427 - -
Phac9g03305 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03305 Phac-Chr9 32562221 32564334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03305 14 458 AGC Kinase Gene Family AT2G26700 54.615 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phac9g03305 Pkinase 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03305 K08286 - gmx:100787216 741.88