Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03260 ATGGAAGAGGAAGAAGCGACGCAGCAACGCCTCACCGACTCCTCCCTAACCACCCATTCACTCACTTCCACTGCTTCCGATGAAGAGCTACTCCACTCGGAAACCCTACTTCTGCATTCTTCTGACCTTCCGCACCACAACGCTGCTCCAGATATGCAAAGAAGCTCTACCGCACGTGAGAGTGGCCAAGATGAGAGTAAGGAGTCAGCTCAGCATTCTAGTGAGGAAACTATTGTAAAGGAGACAGTTGAGGCACCTCAAAAACAGACAGAAAATCAACTTCAGATGTCTGTTTGTTCAACTTCATTATCTAAACTATCACCAACTTCTGTATCACAGTATTTATCATCTGCCCCTGGTCCAATTGTACCAGAACAGAGACCATCTCCTCCTAAGGCTAATAATGTAAAAGTGGCAAAAGTGGACAAAGGAAGTCATTCTGGTGGTACAACCTTATCTTCTGTTTCTGTTACGAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGTTATTACAGGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTCTGTGACCATTCAGGACATGTGATAGAGATTGTTTACAAAAGTCAACATAGTCATGATCCCCCACACAAAATTGATTCCACTAAGGAATGTAAATTCCTGCCTTACAGTGAACCTAAAATGAAATGCAGTGTTCCAAAGCACTCTAGCCGAGTTCGGAATGATTCTGATCCATCATCTTCTCCAAAAGAACCTTTATATGAATCACCTTGCAGTGCTAAAAGGAATCTAGAAAACTCATCTAATGGTGAGAAGGGTAAAGTTTTTTTGAAGGAAGAGCATGTCAATGACCCTGAGCCAAAAAAAAGATTGAACAAAGGTGATGATTTAACATGCTTGGATTCAGCAATAAAACCTGGAAAGAAACCAAAGTTTGTTGTACATGCAGCAGAGGATATGGGGATATCAAGTGATGGATACCGATGGCGCAAATATGGACAAAAATTGGTGAAGGGAAGTCCTCATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAACACAAAAGCTCTCATTATAACATACAAGGGAGTGCATGATCATGACATGCCTGTGCCCAAAAAACGACATGGTCCACCAAGTGCTTCCCTTGTGGCTGCAGCAGCTCCTGCTTCAATGAACAATTTGCAGCTCAAAAGAACTGGTTTGATACAAAACCAGGAAAGTTCTACTCCATGCTCAGAGGACACAGAAGGAGAATTAACCGGGGAGGCGTTGGACCTTGAGGGTGAGAAAGCAATCGAGTCAGCTCGAACTCTTCTAAGTATAGGTTTTGAAATTAAACCTTGTTGA 1425 0.4302 MEEEEATQQRLTDSSLTTHSLTSTASDEELLHSETLLLHSSDLPHHNAAPDMQRSSTARESGQDESKESAQHSSEETIVKETVEAPQKQTENQLQMSVCSTSLSKLSPTSVSQYLSSAPGPIVPEQRPSPPKANNVKVAKVDKGSHSGGTTLSSVSVTRASASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDSTKECKFLPYSEPKMKCSVPKHSSRVRNDSDPSSSPKEPLYESPCSAKRNLENSSNGEKGKVFLKEEHVNDPEPKKRLNKGDDLTCLDSAIKPGKKPKFVVHAAEDMGISSDGYRWRKYGQKLVKGSPHFRNYYRCTSAGCPVRKHIETAVDNTKALIITYKGVHDHDMPVPKKRHGPPSASLVAAAAPASMNNLQLKRTGLIQNQESSTPCSEDTEGELTGEALDLEGEKAIESARTLLSIGFEIKPC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03260 474 Gene3D WRKY domain 148 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 Gene3D WRKY domain 320 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 MobiDBLite consensus disorder prediction 58 82 - -
Phac9g03260 474 ProSiteProfiles WRKY domain profile. 330 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 MobiDBLite consensus disorder prediction 241 306 - -
Phac9g03260 474 MobiDBLite consensus disorder prediction 1 96 - -
Phac9g03260 474 SMART WRKY_cls 335 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 SMART WRKY_cls 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 423 IPR044810 GO:0003700
Phac9g03260 474 FunFam WRKY transcription factor 321 396 - -
Phac9g03260 474 SUPERFAMILY WRKY DNA-binding domain 330 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 MobiDBLite consensus disorder prediction 10 30 - -
Phac9g03260 474 ProSiteProfiles WRKY domain profile. 157 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 SUPERFAMILY WRKY DNA-binding domain 158 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 MobiDBLite consensus disorder prediction 243 257 - -
Phac9g03260 474 Pfam WRKY DNA -binding domain 337 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 Pfam WRKY DNA -binding domain 164 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03260 474 MobiDBLite consensus disorder prediction 284 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03260 Phac-Chr9 32107674 32115585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03260 23 474 WRKY Transcription Factor Family AT4G30935 48.408 2.97e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac9g03260 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03260 - - gmx:100127388 698.353