Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03259 ATGGAAGAGGAAGAAGCGACGCAGCAACGCCTCACCGACTCCTCCCTAACCACCCATTCACTCACTTCCACTGCTTCCGATGAAGAGCTACTCCACTCGGAAACCCTACTTCTGCATTCTTCTGACCTTCCGCACCACAACGCTGCTCATATGCAAAGAAGCTCTACCGCACGTGAGAGTGGCCAAGATGAGAGTAAGGAGTCAGCTCAGCATTCTAGTGAGGAAACTATTGTAAAGGAGACAGTTGAGGCACCTCAAAAACAGACAGAAAATCAACTTCAGATGTCTGTTTGTTCAACTTCATTATCTAAACTATCACCAACTTCTGTATCACAGTATTTATCATCTGCCCCTGGTCCAATTGTACCAGAACAGAGACCATCTCCTCCTAAGGCTAATAATGTAAAAGTGGCAAAAGTGGACAAAGGAAGTCATTCTGGTGGTACAACCTTATCTTCTGTTTCTGTTACGAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGTTATTACAGGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTCTGTGACCATTCAGGACATGTGATAGAGATTGTTTACAAAAGTCAACATAGTCATGATCCCCCACACAAAATTGATTCCACTAAGGAATGTAAATTCCTGCCTTACAGTGAACCTAAAATGAAATGCAGTGTTCCAAAGCACTCTAGCCGAGTTCGGAATGATTCTGATCCATCATCTTCTCCAAAAGAACCTTTATATGAATCACCTTGCAGTGCTAAAAGGAATCTAGAAAACTCATCTAATGGTGAGAAGGGTAAAGTTTTTTTGAAGGAAGAGCATGTCAATGACCCTGAGCCAAAAAAAAGATTGAACAAAGGTGATGATTTAACATGCTTGGATTCAGCAATAAAACCTGGAAAGAAACCAAAGTTTGTTGTACATGCAGCAGAGGATATGGGGATATCAAGTGATGGATACCGATGGCGCAAATATGGACAAAAATTGGTGAAGGGAAGTCCTCATTTCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAACACAAAAGCTCTCATTATAACATACAAGGGAGTGCATGATCATGACATGCCTGTGCCCAAAAAACGACATGGTCCACCAAGTGCTTCCCTTGTGGCTGCAGCAGCTCCTGCTTCAATGAACAATTTGCAGCTCAAAAGAACTGGTTTGATACAAAACCAGGAAAGTTCTACTCCATGCTCAGAGGACACAGAAGGAGAATTAACCGGGGAGGCGTTGGACCTTGAGGGTGAGAAAGCAATCGAGTCAGCTCGAACTCTTCTAAGTATAGGTTTTGAAATTAAACCTTGTTGA 1422 0.4297 MEEEEATQQRLTDSSLTTHSLTSTASDEELLHSETLLLHSSDLPHHNAAHMQRSSTARESGQDESKESAQHSSEETIVKETVEAPQKQTENQLQMSVCSTSLSKLSPTSVSQYLSSAPGPIVPEQRPSPPKANNVKVAKVDKGSHSGGTTLSSVSVTRASASDGYNWRKYGQKQVKSPTGSRSYYRCTHSNCCAKKIKFCDHSGHVIEIVYKSQHSHDPPHKIDSTKECKFLPYSEPKMKCSVPKHSSRVRNDSDPSSSPKEPLYESPCSAKRNLENSSNGEKGKVFLKEEHVNDPEPKKRLNKGDDLTCLDSAIKPGKKPKFVVHAAEDMGISSDGYRWRKYGQKLVKGSPHFRNYYRCTSAGCPVRKHIETAVDNTKALIITYKGVHDHDMPVPKKRHGPPSASLVAAAAPASMNNLQLKRTGLIQNQESSTPCSEDTEGELTGEALDLEGEKAIESARTLLSIGFEIKPC* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03259 473 ProSiteProfiles WRKY domain profile. 156 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 MobiDBLite consensus disorder prediction 242 256 - -
Phac9g03259 473 MobiDBLite consensus disorder prediction 283 305 - -
Phac9g03259 473 SUPERFAMILY WRKY DNA-binding domain 329 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 ProSiteProfiles WRKY domain profile. 329 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 Pfam WRKY DNA -binding domain 336 391 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 Pfam WRKY DNA -binding domain 163 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 SMART WRKY_cls 334 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 SMART WRKY_cls 161 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 422 IPR044810 GO:0003700
Phac9g03259 473 MobiDBLite consensus disorder prediction 240 305 - -
Phac9g03259 473 MobiDBLite consensus disorder prediction 1 95 - -
Phac9g03259 473 Gene3D WRKY domain 319 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 Gene3D WRKY domain 147 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 MobiDBLite consensus disorder prediction 10 30 - -
Phac9g03259 473 MobiDBLite consensus disorder prediction 57 81 - -
Phac9g03259 473 SUPERFAMILY WRKY DNA-binding domain 157 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03259 473 FunFam WRKY transcription factor 320 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03259 Phac-Chr9 32107674 32115585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03259 23 473 WRKY Transcription Factor Family AT4G30935 48.723 3.92e-121 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac9g03259 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03259 - - gmx:100127388 705.286