Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03211 ATGCTTGTAGGTGGGCAGATGAAGATCATGGTGATCAAGATGAGCTTGGGATCTAGCTTCCACAATTCCAGCCTTGAGGACAAGCTTGAACGATGTGATATATGTGGTGCTCGTGGTTTTGTAGAAAAAGTTGTTACTTGCTCTAAATGCAGCGTGATTCGACATGCTTATTGCATTCAAATTAATACCACAATAATTCCTGAAGACTGGCTCTGTGAGACTTGCCAATCCAAGCATGATTCAACTTCACAACATAAAGTGAATCAGGATGTTGGTTCGTGGGCTTCTAAAAGGAAACCATCTGTCAGAAGAGGAAAAGTAAAGTACCTTGACTTGGATGAAGTCATTAGACTTTCTTCTGGGAAGGCTTCGGCTGTGTCAAAAAATGTTATTCCCAAGATTCCCTCCCTGTCTCCAAAAGCAAATCCTCCCATATTACCTCCTAAAGTACTTGGGAAGCTTCCAAGAAATGAAGTACGCAAGAAGCCAATGACTAACCAACATGCTTCTTGCTCATTATTTAAAGGTGGTGAACATAGCGACGATGCTCAGTGTAACAGGTCTAATATGGAAAAAAATGACCCTCAGAGTATTCAGAAAAACTTAAACCTTTATCGTAAATTTTTACCCTCCTCAATTCATGCTTGGAGGGGTCAGATCCAAATTCTTCAAACAGCTTCATCTAGGATACTTTATGATGGGTTTGAGGCCCAACCACCATGCATTGTTAACAAGAAAGCATATAAATTTTCAAGAGAAATGCCATCAGTCCTGCAACTGGAGGCATTTCCTGCATTGAATGTCTTGACTAACATATTCCCAGATGAGTCTCCTAATCTTCAGGATATTGCATTGTACTTCTTTCCATCAGAATGTACTGATAGGTTCAGAAAGGACCTGAATGACATATTGAAGTTTATGAATGACGAGAAAGCAATGCTAAGAAGTTTTATTGATGGAGTGGAGTTGCTAGTATTTACCTCAAATCAACTTGACATAGACTCAAGGGGTGTTATTTCTGAAGTAAAGGGTGGACATTTCCTATGGGGAATCTTTCGTCAATTTAAAATTGATAAAGCTATTCAAAGAGTACCTGCCATGGAGCCGGTTGATATGGAAATTGATATGATTGGAGGAAAAGATGTGGAGGGAAAAGTTGATCACTTTCAGAAATATAAACCCAAGAGTGCCTCTGATGGAGTATAA 1206 0.3947 MLVGGQMKIMVIKMSLGSSFHNSSLEDKLERCDICGARGFVEKVVTCSKCSVIRHAYCIQINTTIIPEDWLCETCQSKHDSTSQHKVNQDVGSWASKRKPSVRRGKVKYLDLDEVIRLSSGKASAVSKNVIPKIPSLSPKANPPILPPKVLGKLPRNEVRKKPMTNQHASCSLFKGGEHSDDAQCNRSNMEKNDPQSIQKNLNLYRKFLPSSIHAWRGQIQILQTASSRILYDGFEAQPPCIVNKKAYKFSREMPSVLQLEAFPALNVLTNIFPDESPNLQDIALYFFPSECTDRFRKDLNDILKFMNDEKAMLRSFIDGVELLVFTSNQLDIDSRGVISEVKGGHFLWGIFRQFKIDKAIQRVPAMEPVDMEIDMIGGKDVEGKVDHFQKYKPKSASDGV* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03211 401 ProSiteProfiles Zinc finger PHD-type profile. 29 78 IPR019787 -
Phac9g03211 401 PANTHER - 32 363 - -
Phac9g03211 401 Pfam PHD-finger 31 77 IPR019787 -
Phac9g03211 401 SUPERFAMILY FYVE/PHD zinc finger 24 81 IPR011011 -
Phac9g03211 401 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 100 IPR013083 -
Phac9g03211 401 SMART PHD_3 31 76 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03211 Phac-Chr9 31563131 31569638 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac9g03211 PHD 6.4e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03211 - - pvu:PHAVU_009G1919001 722.235