Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03206 ATGCAGCCACCCAAGCAAAATATCAAGCTTGAACGATGTGATATATGTGGTGCTCGTGGTTTTGTAGAAAAAGTTGTTACTTGCTCTAAATGCAGCGTGATTCGACATGCTTATTGCATTCAAATTAATACCACAATAATTCCTGAAGACTGGCTCTGTGAGACTTGCCAATCCAAGCATGATTCAACTTCACAACATAAAGTGAATCAGGATGTTGGTTCGTGGGCTTCTAAAAGGAAACCATCTGTCAGAAGAGGAAAAGTAAAGTACCTTGACTTGGATGAAGTCATTAGACTTTCTTCTGGGAAGGCTTCGGCTGTGTCAAAAAATGTTATTCCCAAGATTCCCTCCCTGTCTCCAAAAGCAAATCCTCCCATATTACCTCCTAAAGTACTTGGGAAGCTTCCAAGAAATGAAGTACGCAAGAAGCCAATGACTAACCAACATGCTTCTTGCTCATTATTTAAAGGTGGTGAACATAGCGACGATGCTCAGTGTAACAGGTCTAATATGGAAAAAAATGACCCTCAGAGTATTCAGAAAAACTTAAACCTTTATCGTAAATTTTTACCCTCCTCAATTCATGCTTGGAGGGGTCAGATCCAAATTCTTCAAACAGCTTCATCTAGGATACTTTATGATGGGTTTGAGGCCCAACCACCATGCATTGTTAACAAGAAAGCATATAAATTTTCAAGAGAAATGCCATCAGTCCTGCAACTGGAGGCATTTCCTGCATTGAATGTCTTGACTAACATATTCCCAGATGAGTCTCCTAATCTTCAGGATATTGCATTGTACTTCTTTCCATCAGAATGTACTGATAGGTTCAGAAAGGACCTGAATGACATATTGAAGTTTATGAATGACGAGAAAGCAATGCTAAGAAGTTTTATTGATGGAGTGGAGTTGCTAGTATTTACCTCAAATCAACTTGACATAGACTCAAGGGGTGTTATTTCTGAAGTAAAGGGTGGACATTTCCTATGGGGAATCTTTCGTCAATTTAAAATTGATAAAGCTATTCAAAGAGTACCTGCCATGGAGCCGGTTGATATGGAAATTGATATGATTGGAGGAAAAGATGTGGAGGGAAAAGTTGATCACTTTCAGAAATATAAACCCAAGAGTGCCTCTGATGGAGTATAA 1149 0.3899 MQPPKQNIKLERCDICGARGFVEKVVTCSKCSVIRHAYCIQINTTIIPEDWLCETCQSKHDSTSQHKVNQDVGSWASKRKPSVRRGKVKYLDLDEVIRLSSGKASAVSKNVIPKIPSLSPKANPPILPPKVLGKLPRNEVRKKPMTNQHASCSLFKGGEHSDDAQCNRSNMEKNDPQSIQKNLNLYRKFLPSSIHAWRGQIQILQTASSRILYDGFEAQPPCIVNKKAYKFSREMPSVLQLEAFPALNVLTNIFPDESPNLQDIALYFFPSECTDRFRKDLNDILKFMNDEKAMLRSFIDGVELLVFTSNQLDIDSRGVISEVKGGHFLWGIFRQFKIDKAIQRVPAMEPVDMEIDMIGGKDVEGKVDHFQKYKPKSASDGV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03206 382 ProSiteProfiles Zinc finger PHD-type profile. 10 59 IPR019787 -
Phac9g03206 382 PANTHER - 13 344 - -
Phac9g03206 382 Pfam PHD-finger 12 58 IPR019787 -
Phac9g03206 382 SUPERFAMILY FYVE/PHD zinc finger 11 61 IPR011011 -
Phac9g03206 382 SMART PHD_3 12 57 IPR001965 -
Phac9g03206 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 81 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03206 Phac-Chr9 31563131 31571867 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac9g03206 PHD 6e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03206 - - pvu:PHAVU_009G1919001 722.235