Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03205 ATGCAGCCACCCAAGCAAAATATCAAGCTTGAACGATGTGATATATGTGGTGCTCGTGGTTTTGTAGAAAAAGTTGTTACTTGCTCTAAATGCAGCGTGATTCGACATGCTTATTGCATTCAAATTAATACCACAATAATTCCTGAAGACTGGCTCTGTGAGACTTGCCAATCCAAGCATGATTCAACTTCACAACATAAAGTGAATCAGGATGTTGGTTCGTGGGCTTCTAAAAGGAAACCATCTGTCAGAAGAGGAAAAGTAAAGTACCTTGACTTGGATGAAGTCATTAGACTTTCTTCTGGGAAGGCTTCGGCTGTGTCAAAAAATGTTATTCCCAAGATTCCCTCCCTGTCTCCAAAAGCAAATCCTCCCATATTACCTCCTAAAGTACTTGGGAAGCTTCCAAGAAATGAAGTACGCAAGAAGCCAATGACTAACCAACATGCTTCTTGCTCATTATTTAAAGGTGGTGAACATAGCGACGATGCTCAGTGTAACAGGTCTAATATGGAAAAAAATGACCCTCAGAGTATTCAGAAAAACTTAAACCTTTATCGTAAATTTTTACCCTCCTCAATTCATGCTTGGAGGGGTCAGATCCAAATTCTTCAAACAGCTTCATCTAGGATACTTTATGATGGGTTTGAGGCCCAACCACCATGCATTGTTAACAAGAAAGCATATAAATTTTCAAGAGAAATGCCATCAGTCCTGCAACTGGAGGCATTTCCTGCATTGAATGTCTTGACTAACATATTCCCAGATGAGTCTCCTAATCTTCAGGATATTGCATTGTACTTCTTTCCATCAGAATGTACTGATAGAAAGGACCTGAATGACATATTGAAGTTTATGAATGACGAGAAAGCAATGCTAAGAAGTTTTATTGATGGAGTGGAGTTGCTAGTATTTACCTCAAATCAACTTGACATAGACTCAAGGGGTGTTATTTCTGAAGTAAAGGGTGGACATTTCCTATGGGGAATCTTTCGTCAATTTAAAATTGATAAAGCTATTCAAAGAGTACCTGCCATGGAGCCGGTTGATATGGAAATTGATATGATTGGAGGAAAAGATGTGGAGGGAAAAGTTGATCACTTTCAGAAATATAAACCCAAGAGTGCCTCTGATGGAGTATAA 1143 0.3893 MQPPKQNIKLERCDICGARGFVEKVVTCSKCSVIRHAYCIQINTTIIPEDWLCETCQSKHDSTSQHKVNQDVGSWASKRKPSVRRGKVKYLDLDEVIRLSSGKASAVSKNVIPKIPSLSPKANPPILPPKVLGKLPRNEVRKKPMTNQHASCSLFKGGEHSDDAQCNRSNMEKNDPQSIQKNLNLYRKFLPSSIHAWRGQIQILQTASSRILYDGFEAQPPCIVNKKAYKFSREMPSVLQLEAFPALNVLTNIFPDESPNLQDIALYFFPSECTDRKDLNDILKFMNDEKAMLRSFIDGVELLVFTSNQLDIDSRGVISEVKGGHFLWGIFRQFKIDKAIQRVPAMEPVDMEIDMIGGKDVEGKVDHFQKYKPKSASDGV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03205 380 ProSiteProfiles Zinc finger PHD-type profile. 10 59 IPR019787 -
Phac9g03205 380 Pfam PHD-finger 12 58 IPR019787 -
Phac9g03205 380 SMART PHD_3 12 57 IPR001965 -
Phac9g03205 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 81 IPR013083 -
Phac9g03205 380 SUPERFAMILY FYVE/PHD zinc finger 11 61 IPR011011 -
Phac9g03205 380 PANTHER - 13 342 - -
Phac9g03205 380 MobiDBLite consensus disorder prediction 152 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03205 Phac-Chr9 31563131 31571867 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac9g03205 PHD 6e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03205 - - pvu:PHAVU_009G1919001 727.243