Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03172 ATGGGTCGTGCATTGTTGATGCTGTTGTTTTTTTCCACCATTGTTTTATACCCTTCTTCTCTTGCACTCCCGGAAGATGGACATACATTGTTGGAGATCAAAAGCACTTTGAATGACACAAGGAATTTTCTGAGCAACTGGAGAAAGTCTGATGAGTCTCACTGTACATGGACTGGTATCACTTGTCATCCTGGGCAACAACGAGTTCGCTCAATAAATCTACCTTATATGCAACTGGGGGGTATTATATCTCCCAGCATTGGCAAACTCAGTAGACTGCATAGACTGGCCCTTCATCAGAATGGCTTACATGGAGTTATTCCTAACGAAATTGGAAATTGTACAGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTACAAGGAGGCATCCCATCAGATATTGGAAATCTTTCTTATTTACATGTATTGGATTTATCAAGTAACTCATTAAAGGGTGCTATACCATCTTCTATTGGCCGTCTTACACAATTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCTGACGTTGGAGTACTAAGCACCTTCGGGAACAATGCGTTTATTGGAAACTTAGATCTTTGTGGGCAGCAAGTTCAGAAACCTTGTCGGACATCACTTGGGTTCCCAGTGGTGCTACCACATGCAGAAAGTGATGAAGCTGCAGTTCCTGCCAGAAGATCTTCACATTATGTCAAGTGGCTGTTAGTTGGTGCAATAACAATAATGGGGCTTGTACTTGTTATAACTCTTTCGTCACTATGGATTTGCTTGTTATCAAAGAAGGAAAGAGCTGCTAGAAGATACATAGAAGTTAAGGATCAAGTCAACCCAGAATCAAGTAGGAAGGATGATGCAGGTACCAAACTTATCACCTTCCATGGTGATCTGCCATACACATCATTTGAGATCATAGAGAAGTTGGAGTCTCTCGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACCGTATACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAAGCCGGGAAGGTTCTGATCAGGGCTTTGAGAGGGAACTAGAGATATTGGGCAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGCAGACTTCCTTCTACTAAGCTTCTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAACACCGAACAATCACTGAATTGGAGTACTCGCCTTAAGATAGCGCTTGGTTCTGCCCGGGGCTTGGCTTACTTGCACCACGACTGCTGCCCGAAAATTGTGCACCGCGACATAAAATCCAGCAACATCCTTCTTGATGAGAACATGGACCCTCGTGTCTCTGATTTTGGTCTAGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACCTTTGGTTATCTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACTGAGAAGTCAGATGTGTATAGTTTTGGAGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTACATTTGCAAGCAGAGGTGTAAATGTTGTTGGTTGGATGAACGCGTTCCTGAAAGAAAATAGATTGGAGGAGGTAGTAGACAAAAGATGCAGTGATGCAGATTCAGAATCTGTGGAAGTAATTCTTGAAATGGCAGCAAGTTGCACTGATGCAAATGCTGATGAACGTCCATCAATGAACCAAGTGTTACAGATACTAGAACAAGAGGTTATGTCTCCTTGCCCAAGTGACTTTTATGAGTCACACTCAGATCACTGA 1812 0.4249 MGRALLMLLFFSTIVLYPSSLALPEDGHTLLEIKSTLNDTRNFLSNWRKSDESHCTWTGITCHPGQQRVRSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEIGNCTELRALYLRANYLQGGIPSDIGNLSYLHVLDLSSNSLKGAIPSSIGRLTQLRVLNLSTNFFSGEIPDVGVLSTFGNNAFIGNLDLCGQQVQKPCRTSLGFPVVLPHAESDEAAVPARRSSHYVKWLLVGAITIMGLVLVITLSSLWICLLSKKERAARRYIEVKDQVNPESSRKDDAGTKLITFHGDLPYTSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQSLNWSTRLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMDPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFASRGVNVVGWMNAFLKENRLEEVVDKRCSDADSESVEVILEMAASCTDANADERPSMNQVLQILEQEVMSPCPSDFYESHSDH* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03172 603 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03172 603 Pfam Protein kinase domain 319 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03172 603 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Phac9g03172 603 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 392 595 - -
Phac9g03172 603 SUPERFAMILY L domain-like 23 206 - -
Phac9g03172 603 SUPERFAMILY Protein kinase-like (PK-like) 299 585 IPR011009 -
Phac9g03172 603 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 69 585 - -
Phac9g03172 603 Gene3D Phosphorylase Kinase; domain 1 279 391 - -
Phac9g03172 603 SMART serkin_6 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03172 603 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 185 - -
Phac9g03172 603 Gene3D Ribonuclease Inhibitor 24 210 IPR032675 -
Phac9g03172 603 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Phac9g03172 603 Gene3D Transferase(Phosphotransferase) domain 1 392 593 - -
Phac9g03172 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03172 Phac-Chr9 31150402 31155140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03172 5 593 Receptor kinase-like Gene Family AT2G35620 49.066 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phac9g03172 Pkinase 7.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03172 - - gmx:100805042 1123.61