Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03171 ATGAGTCTCACTGTACATGGACTGGTATCACTTGTCATCCTGGGCAACAACGAGTTCGCTCAATGTATAAATCTACCTTATATGCAACTGGGGGGTATTATATCTCCCAGCATTGGCAAACTCAGTAGACTGCATAGACTGGCCCTTCATCAGAATGGCTTACATGGAGTTATTCCTAACGAAATTGGAAATTGTACAGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTACAAGGAGGCATCCCATCAGATATTGGAAATCTTTCTTATTTACATGTATTGGATTTATCAAGTAACTCATTAAAGGGTGCTATACCATCTTCTATTGGCCGTCTTACACAATTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCTGACGTTGGAGTACTAAGCACCTTCGGGAACAATGCGTTTATTGGAAACTTAGATCTTTGTGGGCAGCAAGTTCAGAAACCTTGTCGGACATCACTTGGGTTCCCAGTGGTGCTACCACATGCAGAAAGTGATGAAGCTGCAGTTCCTGCCAGAAGATCTTCACATTATGTCAAGTGGCTGTTAGTTGGTGCAATAACAATAATGGGGCTTGTACTTGTTATAACTCTTTCGTCACTATGGATTTGCTTGTTATCAAAGAAGGAAAGAGCTGCTAGAAGATACATAGAAGTTAAGGATCAAGTCAACCCAGAATCAAGTAGGAAGGATGATGCAGGTACCAAACTTATCACCTTCCATGGTGATCTGCCATACACATCATTTGAGATCATAGAGAAGTTGGAGTCTCTCGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACCGTATACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAAGCCGGGAAGGTTCTGATCAGGGCTTTGAGAGGGAACTAGAGATATTGGGCAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGCAGACTTCCTTCTACTAAGCTTCTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAACACCGAACAATCACTGAATTGGAGTACTCGCCTTAAGATAGCGCTTGGTTCTGCCCGGGGCTTGGCTTACTTGCACCACGACTGCTGCCCGAAAATTGTGCACCGCGACATAAAATCCAGCAACATCCTTCTTGATGAGAACATGGACCCTCGTGTCTCTGATTTTGGTCTAGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACCTTTGGTTATCTGGCACCAGAGTATCTACAAAGTGGAAGAGCCACTGAGAAGTCAGATGTGTATAGTTTTGGAGTTCTATTGCTAGAACTTGTAACTGGAAAGAGACCTACAGATCCTACATTTGCAAGCAGAGGTGTAAATGTTGTTGGTTGGATGAACGCGTTCCTGAAAGAAAATAGATTGGAGGAGGTAGTAGACAAAAGATGCAGTGATGCAGATTCAGAATCTGTGGAAGTAATTCTTGAAATGGCAGCAAGTTGCACTGATGCAAATGCTGATGAACGTCCATCAATGAACCAAGTGTTACAGATACTAGAACAAGAGGTTATGTCTCCTTGCCCAAGTGACTTTTATGAGTCACACTCAGATCACTGA 1665 0.4258 MSLTVHGLVSLVILGNNEFAQCINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEIGNCTELRALYLRANYLQGGIPSDIGNLSYLHVLDLSSNSLKGAIPSSIGRLTQLRVLNLSTNFFSGEIPDVGVLSTFGNNAFIGNLDLCGQQVQKPCRTSLGFPVVLPHAESDEAAVPARRSSHYVKWLLVGAITIMGLVLVITLSSLWICLLSKKERAARRYIEVKDQVNPESSRKDDAGTKLITFHGDLPYTSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQSLNWSTRLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMDPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFASRGVNVVGWMNAFLKENRLEEVVDKRCSDADSESVEVILEMAASCTDANADERPSMNQVLQILEQEVMSPCPSDFYESHSDH* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03171 554 Gene3D Phosphorylase Kinase; domain 1 230 342 - -
Phac9g03171 554 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 23 536 - -
Phac9g03171 554 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 35 159 - -
Phac9g03171 554 ProSiteProfiles Protein kinase domain profile. 267 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03171 554 Pfam Protein kinase domain 270 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03171 554 Gene3D Ribonuclease Inhibitor 9 161 IPR032675 -
Phac9g03171 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Phac9g03171 554 SUPERFAMILY Protein kinase-like (PK-like) 249 536 IPR011009 -
Phac9g03171 554 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Phac9g03171 554 Gene3D Transferase(Phosphotransferase) domain 1 343 544 - -
Phac9g03171 554 SMART serkin_6 267 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03171 554 SUPERFAMILY L domain-like 13 157 - -
Phac9g03171 554 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 343 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03171 Phac-Chr9 31150402 31155140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03171 23 544 Receptor kinase-like Gene Family AT2G35620 51.724 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phac9g03171 Pkinase 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03171 - - gmx:100805042 1016.53