Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03170 ATGGGTCGTGCATTGTTGATGCTGTTGTTTTTTTCCACCATTGTTTTATACCCTTCTTCTCTTGCACTCCCGGAAGATGGACATACATTGTTGGAGATCAAAAGCACTTTGAATGACACAAGGAATTTTCTGAGCAACTGGAGAAAGTCTGATGAGTCTCACTGTACATGGACTGGTATCACTTGTCATCCTGGGCAACAACGAGTTCGCTCAATAAATCTACCTTATATGCAACTGGGGGGTATTATATCTCCCAGCATTGGCAAACTCAGTAGACTGCATAGACTGGCCCTTCATCAGAATGGCTTACATGGAGTTATTCCTAACGAAATTGGAAATTGTACAGAGCTTAGAGCACTGTACTTGAGAGCTAATTATTTACAAGGAGGCATCCCATCAGATATTGGAAATCTTTCTTATTTACATGTATTGGATTTATCAAGTAACTCATTAAAGGGTGCTATACCATCTTCTATTGGCCGTCTTACACAATTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCCGGTGAAATCCCTGACGTTGGAGTACTAAGCACCTTCGGGAACAATGCGTTTATTGGAAACTTAGATCTTTGTGGGCAGCAAGTTCAGAAACCTTGTCGGACATCACTTGGGTTCCCAGTGGTGCTACCACATGCAGAAAGTGATGAAGCTGCAGTTCCTGCCAGAAGATCTTCACATTATGTCAAGTGGCTGTTAGTTGGTGCAATAACAATAATGGGGCTTGTACTTGTTATAACTCTTTCGTCACTATGGATTTGCTTGTTATCAAAGAAGGAAAGAGCTGCTAGAAGATACATAGAAGTTAAGGATCAAGTCAACCCAGAATCAAGTAGGAAGGATGATGGTACCAAACTTATCACCTTCCATGGTGATCTGCCATACACATCATTTGAGATCATAGAGAAGTTGGAGTCTCTCGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACCGTATACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAAGCCGGGAAGGTTCTGATCAGGGCTTTGAGAGGGAACTAGAGATATTGGGCAGCATCAAGCACATAAATCTAGTTAACCTGCGTGGTTACTGCAGACTTCCTTCTACTAAGCTTCTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAACACCGAACAATCACTGAATTGGAGTACTCGCCTTAAGATAGCGCTTGGTTCTGCCCGGGGCTTGGCTTACTTGCACCACGACTGCTGCCCGAAAATTGTGCACCGCGACATAAAATCCAGCAACATCCTTCTTGATGAGAACATGGACCCTCGTGTCTCTGATTTTGGTCTAGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTGGTTGCTGGCACCTTTGGTTATCTGGCACCAGGTATGTATTTAGTTCCACACACCAGCAGAGTGTCATCTGGATTAGGCCACTGA 1506 0.4296 MGRALLMLLFFSTIVLYPSSLALPEDGHTLLEIKSTLNDTRNFLSNWRKSDESHCTWTGITCHPGQQRVRSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGVIPNEIGNCTELRALYLRANYLQGGIPSDIGNLSYLHVLDLSSNSLKGAIPSSIGRLTQLRVLNLSTNFFSGEIPDVGVLSTFGNNAFIGNLDLCGQQVQKPCRTSLGFPVVLPHAESDEAAVPARRSSHYVKWLLVGAITIMGLVLVITLSSLWICLLSKKERAARRYIEVKDQVNPESSRKDDGTKLITFHGDLPYTSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENTEQSLNWSTRLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENMDPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPGMYLVPHTSRVSSGLGH* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03170 501 SUPERFAMILY L domain-like 23 207 - -
Phac9g03170 501 Gene3D Ribonuclease Inhibitor 24 210 IPR032675 -
Phac9g03170 501 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 185 - -
Phac9g03170 501 PANTHER RECEPTOR-LIKE PROTEIN 55 33 149 - -
Phac9g03170 501 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Phac9g03170 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Phac9g03170 501 FunFam Protein kinase superfamily protein 391 463 - -
Phac9g03170 501 SUPERFAMILY Protein kinase-like (PK-like) 293 489 IPR011009 -
Phac9g03170 501 Gene3D Transferase(Phosphotransferase) domain 1 391 496 - -
Phac9g03170 501 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Phac9g03170 501 Gene3D Phosphorylase Kinase; domain 1 278 390 - -
Phac9g03170 501 SMART serkin_6 315 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03170 501 ProSiteProfiles Protein kinase domain profile. 315 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03170 501 Pfam Protein kinase domain 317 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03170 Phac-Chr9 31150402 31155140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03170 5 484 Receptor kinase-like Gene Family AT2G35620 47.917 3.02e-144 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phac9g03170 Pkinase 7.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03170 - - gmx:100805042 905.975