Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03161 ATGGAGTTTGGTTCAGAAAGATCTGCTCATGAAGTCAAGGAAGAGAAGAGAACTGAATCCACTCTTGGAGGTCAAGAACATCGTCGTGAACAAGAGATTGTTATGCAGGAAGCACCCCTGACAACTCCAGAAAGATCCACCATCGAGATTGGGCCAAACGCTTCTTGCTTATCCAAAAAAGAAGAGGTTGATGAACTTCAAAATGCAAAAGCCGAAATGGGTGAAGTTATAGAGGAAAATCAAAGATTAAAGATGCGTTTGAACCGAATACTAAATGATTACCGAACACTGCAAATGCAATTCCACAGTGTAGTTGAACAGGAGACAAAAGATTGTTCTGATAAACCGAAGAATGATCAAGAAATGAGGGAGGAATCAGAACTAGTTTCCCTGAGTCTTGGAAGAATTCCAATTCCAAGAAACAACGAGAAAGGTAAAGTCCCTAAAATATTGGAAGAGGAAGAAGATGAAGAAGGGTTGTCCCTGGGATTGGAGTGCAAATATGAAACATCAAAATCTGGAAGCACAACTGAACACGTGCCAAATCCAAGCCCTACCAATAGTGTTGAAGAAGTGCCAAAGGAAGAAGCTGCTGGAGAGAGTTGGCCAGCAAGCAAGGGACACAAGACAAACAGAGATGTTGGAGAGGTTGAGGTTTCCGAACAAAATCCTGCAAAGAAGGCAAGAGTTTGTGTGAGAGCAAGATGTGACACCCCAACTTTGAACGATGGATGTCAATGGAGGAAATATGGACAGAAGATTTCAAAGGGAAATCCTTGTCCTCGAGCTTACTATCGTTGCACAGTTGCACCATCATGCCCAGTAAGAAAGCAGGTGCAAAGATGTGCTCAAGACATGACCATATTAATCACCACCTACGAAGGAACCCACAACCACCCTCTTCCTCTTTCAGCAACAGCCATGGCTTCCACCACTTCAGCAGCTGCTTCAATGCTATTGTCTGGATCATCAACATCACACTCTGGATCAAGTCCTTCCCCAAACATCACCACCACTGCTGCAGATCTTCATGGAATCAAATTTTCCCTATCAGATGGTTCACAATCAAAGCAATACTACCTTTCCCATCCTGCACTCTCATCTTCAAATTCACACCCCACCATCACTCTCGACCTCACTTCCAATCCGTTGTCCTCTTCAGCCCCTTTTGCGAAATTCACTTCAAATTCAAACTACAACCCTCAAAGGTACCCTCCTTCCACCAGCCTAAGTTTCAGTTCCTCCGAATCTAATACAAGTTCTTGGAGCAACGGCTTCTTCACCTACAACACTCAACCATATAATAACAACAGGAATGCGAATGTGAATATCCTTGGTAACATAAACCTTGGAAGACAACAACCGGAACAACAACCGATGGAGAACATCTACGGTTCCTTCATGCAAAGGAACAACAATCCAATCCCTCCAGCACAACATTCTCTGCCAGACACCATAGCAGCAGCAACAAAAGTAATCACAGCAGACCCTAATTTTCAGTCAGCTTTGGCAGCAGCACTTTCTTCAATTATTGGCTCAGGAAGCAGTCAGGGAAACCAAGGTGCTGCAGAAAATCCGAGTCAGAAAATAAAATGGGGTGAATTGTTTCCACCATCTTTTGCCTTACCTTCATCTTCAAAAGTCAATGGATGTGCTTCAAGCTTCTTGAACAAATCACCAGCTAATCCACAACCAGGAAGTTTGATGTTTCTTCAGCCACCTTTGCCACTTTCTAGCCCCAAAAGCGCTTCTGGGTCTCCCGGAGATCACAGAGAAAAGAAAAATTAG 1788 0.4362 MEFGSERSAHEVKEEKRTESTLGGQEHRREQEIVMQEAPLTTPERSTIEIGPNASCLSKKEEVDELQNAKAEMGEVIEENQRLKMRLNRILNDYRTLQMQFHSVVEQETKDCSDKPKNDQEMREESELVSLSLGRIPIPRNNEKGKVPKILEEEEDEEGLSLGLECKYETSKSGSTTEHVPNPSPTNSVEEVPKEEAAGESWPASKGHKTNRDVGEVEVSEQNPAKKARVCVRARCDTPTLNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAQDMTILITTYEGTHNHPLPLSATAMASTTSAAASMLLSGSSTSHSGSSPSPNITTTAADLHGIKFSLSDGSQSKQYYLSHPALSSSNSHPTITLDLTSNPLSSSAPFAKFTSNSNYNPQRYPPSTSLSFSSSESNTSSWSNGFFTYNTQPYNNNRNANVNILGNINLGRQQPEQQPMENIYGSFMQRNNNPIPPAQHSLPDTIAAATKVITADPNFQSALAAALSSIIGSGSSQGNQGAAENPSQKIKWGELFPPSFALPSSSKVNGCASSFLNKSPANPQPGSLMFLQPPLPLSSPKSASGSPGDHREKKN* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03161 595 Coils Coil 59 100 - -
Phac9g03161 595 FunFam probable WRKY transcription factor 31 226 303 - -
Phac9g03161 595 ProSiteProfiles WRKY domain profile. 236 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03161 595 MobiDBLite consensus disorder prediction 1 34 - -
Phac9g03161 595 Gene3D WRKY domain 225 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac9g03161 595 MobiDBLite consensus disorder prediction 107 129 - -
Phac9g03161 595 MobiDBLite consensus disorder prediction 553 595 - -
Phac9g03161 595 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 523 IPR044810 GO:0003700
Phac9g03161 595 MobiDBLite consensus disorder prediction 206 221 - -
Phac9g03161 595 Pfam WRKY DNA -binding domain 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03161 595 MobiDBLite consensus disorder prediction 107 128 - -
Phac9g03161 595 SMART WRKY_cls 241 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac9g03161 595 MobiDBLite consensus disorder prediction 1 48 - -
Phac9g03161 595 MobiDBLite consensus disorder prediction 139 158 - -
Phac9g03161 595 MobiDBLite consensus disorder prediction 169 221 - -
Phac9g03161 595 MobiDBLite consensus disorder prediction 169 189 - -
Phac9g03161 595 SUPERFAMILY WRKY DNA-binding domain 234 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03161 Phac-Chr9 31069441 31073245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03161 65 529 WRKY Transcription Factor Family AT1G18860 40.546 1.31e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac9g03161 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03161 - - vun:114162352 835.484