Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03154 ATGGCAAACGAACCAGCGAGCTTCTGGACTCAGGCAAACGCACTCCTTAGGAAGAATTTAACCTTTCAGAAACGAAATGTTAAAACAAACGTTCGACTCATCATGTTCCCGTTCCTGTTGTGTCTGTTGCTGGTTCTGCTGCAACGCCTGGTAGATACTCAATTGGACAAGGCAGAGAACAAGTGTGGGTGCGTTTGTGTGAGGAACCAAGGGGAAACGTGTGTGGAGGAGCAGTGCGGGCTTGAGCATTCGGATTTGGACCAAGTTTCCACCTGCCCTGTTCCCAGTCCTCAGGAATGGCCTCCTCTGTTGCAAGTGCCGGCTCCACAGTACCGAGCTGTGAGAACAGACAATTTTCCCTTTTCCGATTATCCAAACGCCTCCTGCAGGAGGAATGGCTCCTGCCCTGTCACTATGCTCTTCACTGGCACAAACCAGTCTTTTGGAGAAGCCATATCTGGGAATATGATCCCAAGTTCCTTCACTCCTATAAACAGCTCTGCTGTTATGGCTAATTTGGCAGCAAATGTCGCTGGATCAGCCTCAATGACAGAGAACACCAATTTTCTGGAACCTGCTTTCTTTTCGGATGAACCTATTTATTATCTACAAAGTCAGTGCACGCAGAACTCTACATTTTCCATTTCTTTTGAGCTATCAGCAGCAACTAGCAGACAACAAGAGTTAGTTTGCGCTGAGGGTTTACGTTTATGGCGTAATAGTGCTTCTGAAGTGAACAATGAGCTATATAGAGGCTATCGGAAAAGTAATCTAGAGGAACAAATCGAAGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATGGAAACATATTTAATGTCAGCATATGGTACAACTCCACCTACAAAAACGACACTGGTTCTACTCAAATTGCATTGGCGCGTATTCCTCGTTCTGTTAATTTGGTATCAGATGCCTACCTCCAGTTTCTGTTGGGACCTGGTACCAAAATGTTTTTTGAGTTTGTGAAGGAAATGCCAAAACCTTCAACCCCAATTAAATTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTATTGCCCTGACAACGCTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCGTATGGATATTTTCTTGCCATATCAATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGGTTGAATTTCTTCACAATGAATGATTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTGTACTGGCTTTTTTGCTGGCTTCCGTGTTTTCAAATGTTAAAACTGCTACAGTAATTTCATATATAGGTGTGTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACATCATTTCCGAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTTCGCAATATTCCTTTAGTGGGGATGCTTTGGGGACTAAAGGTATGCGCTGGAGCGATCTGAGTGATAGCGAAAATGGCATGAAGGAGGTCTTAATTATAATGTTTGTGGAGTGGCTTCTGGTGCTTTTCTTTGCTTATTATATCGATCAAGTTTTGTCATCTGGAAGAAGAAAAAGTCCTCTTTTTTTCTTGAAAGGATTTCAGAAAAAGTCTCATTCATCTTTTCGGAAGCCTAGTATCCGAAGGCAGAAATCTAAGGTGTTTGTTCAGATGGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCGACCATTAATCAAGCAATTGTATGCGACGACCTGAAAAAGGTCTACCCGGGGAGGGATGGTAATCCTGAGAAATTTGCAGTGAGAGGATTGTCCCTTGCTTTGCCTCAAGGAGAATGCTTTGGTATGCTTGGTCCCAATGGTGCAGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCCGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGATTTGCTGTGGGAATCTCTGACAGGAAGAGAGCATCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTGACAGAAGCGGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTTATGGAGGAGTTGCAGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAAAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTGAAGCGTGCAAAACAAGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAGGCAGAAGTCCTATGCGATCGATTAGGAATATTTGTAGATGGAAGCTTGCAGTGCATAGGAAACCCAAAGCAGTTGAAAGGTAGGTATGGAGGAAGTTATGTGTTCACAATGACAACATCTGTGGATGATGAAAAGGATGTAGAGAATTTGGTGCGAGGGCTTTCACCAAATGCTAACAAGATCTACCATATCTCTGGTACACAAAAGTTTGAGCTACCAAAGGAGGAGGTTAAAATAGCAAATGTATTTAAAGCAGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCATGGGGTTTAGCTGATACCACATTGGAAGATGTCTTTATCAAAGTTGCACGTGGGGCTCAGGCATTTGACACTTTGTCATAG 2841 0.4182 MANEPASFWTQANALLRKNLTFQKRNVKTNVRLIMFPFLLCLLLVLLQRLVDTQLDKAENKCGCVCVRNQGETCVEEQCGLEHSDLDQVSTCPVPSPQEWPPLLQVPAPQYRAVRTDNFPFSDYPNASCRRNGSCPVTMLFTGTNQSFGEAISGNMIPSSFTPINSSAVMANLAANVAGSASMTENTNFLEPAFFSDEPIYYLQSQCTQNSTFSISFELSAATSRQQELVCAEGLRLWRNSASEVNNELYRGYRKSNLEEQIEEIAAGYDFLNSNGNIFNVSIWYNSTYKNDTGSTQIALARIPRSVNLVSDAYLQFLLGPGTKMFFEFVKEMPKPSTPIKFDLASLLGGLFFTWVILQLFPIALTTLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQFVFYFIYINLQIVLAFLLASVFSNVKTATVISYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYSFSGDALGTKGMRWSDLSDSENGMKEVLIIMFVEWLLVLFFAYYIDQVLSSGRRKSPLFFLKGFQKKSHSSFRKPSIRRQKSKVFVQMEKPDVTQEREKVEQLLLEPTINQAIVCDDLKKVYPGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTEAVEESLKSVNLFYGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKQLKGRYGGSYVFTMTTSVDDEKDVENLVRGLSPNANKIYHISGTQKFELPKEEVKIANVFKAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03154 946 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 861 IPR003439 GO:0005524
Phac9g03154 946 Pfam ABC transporter 646 790 IPR003439 GO:0005524
Phac9g03154 946 Gene3D - 616 878 IPR027417 -
Phac9g03154 946 FunFam ABC transporter A family member 7 613 889 - -
Phac9g03154 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 861 IPR027417 -
Phac9g03154 946 Coils Coil 255 275 - -
Phac9g03154 946 SMART AAA_5 654 837 IPR003593 GO:0016887
Phac9g03154 946 ProSitePatterns ABC transporters family signature. 763 777 IPR017871 GO:0005524|GO:0016887
Phac9g03154 946 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 593 940 IPR026082 GO:0016020|GO:0055085|GO:0140359
Phac9g03154 946 Pfam ABC-2 family transporter protein 252 554 IPR013525 GO:0016020|GO:0140359
Phac9g03154 946 CDD ABC_subfamily_A 628 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03154 Phac-Chr9 30977137 30985045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03154 628 853 Calmodulin-binding Proteins AT2G36910 24.066 8.95e-12 67.4