Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03146 ATGTCTGGCAGGAGAAACTCCAGAACTTCAAAATTCACAGAAAGTGGGATTAATGATCTAGTGATGAGGCTACAAGCACTGCTGCCACAACTAAACCAAACAAGCGACTCAAGGGTATTACACACCAAGGCATCAGTAAGCATGATGCAGATCATAAAGGAAACTTGCTCTCACATCAGTATGCTTCAGAGAGAGGTAAAAGAACATGGTGAAAGGCTAGCAGAGTTAGTGAATTCTGCATACACTAGTGATGTTAACGAGGAGTGTCTTAGAAGACTTCATCTCTGA 288 0.4201 MSGRRNSRTSKFTESGINDLVMRLQALLPQLNQTSDSRVLHTKASVSMMQIIKETCSHISMLQREVKEHGERLAELVNSAYTSDVNEECLRRLHL* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03146 95 PANTHER DNA BINDING PROTEIN 1 93 IPR044172 -
Phac9g03146 95 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 80 IPR036638 GO:0046983
Phac9g03146 95 Coils Coil 59 79 - -
Phac9g03146 95 Gene3D - 5 87 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03146 Phac-Chr9 30778926 30779975 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03146 12 83 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 40.278 1.22e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03146 - K20474 pvu:PHAVU_009G188800g 178.718