Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03140 ATGATGGGATCTGATACTTCTGCCACTGTTATTCAGAATAAGGTCAACAATTCACAGGATGTATCAAGAAAGAGGTCGAGTCCCAATAAACAGAAACAAGAAAAAGTCCCCAAGAGAATTCGAAAGGCTGAAAGAGAGAGAGAGAAGCGTGAACAGTTGAATGAACTCTTTCTTGGTCTTGCTGATACACTTGACCTTAGTGAACAGAGCAGTGGAAAAGCTTCTATATTGAGGGAAGCCATTAGATTGCTAAAAGACTTGTTCAGTCAGATTCAGTCCTTGAAAAAGGATAGTGAATCTCTGTTGTCCGAGAGTCACTATGTGAGTATGGAGAAAAATGAGATGGTGGAGGAGAATTGTGTTCTGAAAACTCAAATTGAGAAACTTGAAGGTGAGATAAAAGCAAGAGTAGCCCAATGTGGACCTAACCTGATGAATGTAGCTTCTGAGATGGAATTTGCACAACCAGAAAAGATGAGAAAGTTTCCAGGGGAGAGCCTCCAATTGTCCACCACAGAATCAACAGTGCAGCATGGCCATGCAGTTTTGGTTGTCCCCTTAAGTAATCATCATGGGAAAGGTGCTTTAGCAGCTCATAATGTTGCAGAGAAGACCTCAAAACCCACATCCACTATCAGTAAACCACATGCCAGGTATCCCACCCCAATGGATTCATGGCCTCTACAGTTACTTGCAGAGCAACCAACTTCAAATTAA 717 0.4198 MMGSDTSATVIQNKVNNSQDVSRKRSSPNKQKQEKVPKRIRKAEREREKREQLNELFLGLADTLDLSEQSSGKASILREAIRLLKDLFSQIQSLKKDSESLLSESHYVSMEKNEMVEENCVLKTQIEKLEGEIKARVAQCGPNLMNVASEMEFAQPEKMRKFPGESLQLSTTESTVQHGHAVLVVPLSNHHGKGALAAHNVAEKTSKPTSTISKPHARYPTPMDSWPLQLLAEQPTSN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03140 238 PANTHER TRANSCRIPTION FACTOR BHLH47 2 237 - -
Phac9g03140 238 Gene3D - 32 113 IPR036638 GO:0046983
Phac9g03140 238 MobiDBLite consensus disorder prediction 1 49 - -
Phac9g03140 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 37 87 IPR011598 GO:0046983
Phac9g03140 238 MobiDBLite consensus disorder prediction 199 238 - -
Phac9g03140 238 SMART finulus 43 93 IPR011598 GO:0046983
Phac9g03140 238 Pfam Helix-loop-helix DNA-binding domain 38 87 IPR011598 GO:0046983
Phac9g03140 238 MobiDBLite consensus disorder prediction 25 49 - -
Phac9g03140 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 101 IPR036638 GO:0046983
Phac9g03140 238 Coils Coil 77 104 - -
Phac9g03140 238 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03140 Phac-Chr9 30734634 30736732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03140 35 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 45.622 3.41e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03140 - - pvu:PHAVU_009G188200g 251.906