Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03138 ATGGAGGGAGGTGATGATTTCCACCACCACCACCACCATCACCATCACCACCACCAACACCGACAAGACTTCCCATTCCAACTCCTCGAGAAGAAAGAAGACCAAGACCCCTCTTCTTGCTCCACTTCCTCCCCATACCCTTCCCTAGCCATCTCAGCCGAACCCTCCACCTCCAACTCAACCCCATCCAACAACAACACCGCCCTCATCCCCACACACTCTGAGTCCTCCCCCAAAAAGCCACCTCCCAAAAGAACCTCCACCAAAGACCGCCACACCAAAGTCGACGGCCGCGGTCGCCGAATTCGAATGCCTGCTCTCTGCGCTGCCAGAGTGTTCCAGCTCACGCGGGAGCTTGGACACAAGTCTGACGGCGAGACCATAGAGTGGCTCCTCCAGCAGGCGGAGCCAGCTGTCATCGCCGCCACCGGCACCGGTACCATCCCCGCTAACTTCACATCCCTTAACATATCTCACCGGAGCTCGGGCTCCTCCATATCCGTCCCCTCCCAGCTGCGATCCAACTACTTCAATTCAAACTTTTCTCTCCAACCCCGGAGAAGCCTGTTCCTTGAAAACACCAATACTTCCACAACACTCCTCAATTTTCAATCCAACAACCCCATCTCCACTTCCATGTTCCAACCCAAGCACGAATTGCGCGATTCATCATCCCTAGACTTATCCTCGGAGAACAACGAAGAGGGTTTGGGAAGGAAAAGACGACCCTTGGAGCAAGACCTATCCTCAACCATGCAACACCCAGTTGGAAGCTATTTGATGCAATCAAGCAGCTCAGGGACAATTCCGGAGAGCCATGCTCAAATTCCGGCGAATATATGGATGGTGGCGAATTCCAATAGCCAAGGTGTGAGTGGTGAAGCTCCTTTGTGGACATTCCCCGGTGTGAGTAACAGTGCTTTGTATAGAGGAAACATGTCAAGTGGGTTGCATTTCATGAACTTTCCTACCCCTATGGCCCTTTTACCTGGTCAACAATTAGGGTCTTCAGGGATTGGTGGGAACATCAACGAAGGGCATTTGAGCATGCTTTCGGGGCTTAACCCTTACCGGACGGTCATCGGCGTTTCGGAATCTCAGGCGAGTGAGTCACACTCACATCACGGTGGAAGCGAGGATCGGCACGATGATAATTAA 1158 0.5294 MEGGDDFHHHHHHHHHHHQHRQDFPFQLLEKKEDQDPSSCSTSSPYPSLAISAEPSTSNSTPSNNNTALIPTHSESSPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISHRSSGSSISVPSQLRSNYFNSNFSLQPRRSLFLENTNTSTTLLNFQSNNPISTSMFQPKHELRDSSSLDLSSENNEEGLGRKRRPLEQDLSSTMQHPVGSYLMQSSSSGTIPESHAQIPANIWMVANSNSQGVSGEAPLWTFPGVSNSALYRGNMSSGLHFMNFPTPMALLPGQQLGSSGIGGNINEGHLSMLSGLNPYRTVIGVSESQASESHSHHGGSEDRHDDN* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03138 385 ProSiteProfiles TCP domain profile. 88 142 IPR017887 -
Phac9g03138 385 MobiDBLite consensus disorder prediction 365 385 - -
Phac9g03138 385 MobiDBLite consensus disorder prediction 78 101 - -
Phac9g03138 385 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 377 IPR005333 GO:0003700
Phac9g03138 385 Pfam TCP family transcription factor 86 243 IPR017887 -
Phac9g03138 385 MobiDBLite consensus disorder prediction 22 37 - -
Phac9g03138 385 MobiDBLite consensus disorder prediction 212 246 - -
Phac9g03138 385 MobiDBLite consensus disorder prediction 1 103 - -
Phac9g03138 385 MobiDBLite consensus disorder prediction 38 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03138 Phac-Chr9 30685127 30687543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03138 69 384 TCP Transcription Factor Family AT3G47620 44.231 9.40e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac9g03138 TCP 2.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03138 - - gmx:100809154 504.212