Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03133 ATGGGAAGACCACCTTGCTGTGACAAAATTGGGATTAAGAAAGGGCCATGGACTCCTGAGGAAGACATCATCTTGGTCTCTTACATTCAAGAGCATGGACCCGGGAACTGGAGACTGGTTCCCTCTAATACAGGGTTGATGAGATGCAGCAAAAGCTGCAGACTCAGATGGACCAACTATCTCCGACCAGGAATCAAACGAGGCAATTTCACCGATCATGAAGAGAAAATGATAATCCACCTCCAAGCCCTTTTGGGTAACAGATGGGCTGCAATAGCCTCCTATCTTCCACAGAGGACAGACAATGACATCAAGAACTATTGGAATACCCATTTGAAGAAGAAGCTGAAGAAGATGCAAAGTGAGGGTGATGATGAAGGTAACAATTATGAGAAGGGAAAGTCTTGTTCACAGCTAAAGGGTCAGTGGGAGAGAAGACTTCAAACAGATATCCACACGGCCAAACAAGCCTTATGTGAAGCTTTGTCCCTTGACAAACCAACCCAAATTTTCCCTGAGACCAAATTACCCTCCACTTCTTCTCAATGTTTCCATGATCACCACCACCCCACATCACCAAGCCAAACATCCTTGTACGCCTCAAGCACAGAAAACATAGCCAGGTTGCTGGACAATTGGATGAAGAAATCCCCAAAAAAAACCGAAACAAACTACTCCATCAGCAACATGGTAACCACAGGGTCTAGTTCCAGTGAGGGAACACAAAGCACCGTCACATGCACACAGGACCACCTTGACTCCTTGTGGAGCTTCAAGTCTGAACGTTCACGGTCTGTGTCAGCAGAAGAAAACACCAACTTGGTCGAGAGCAAGCCGAATCTAGAGACGCAAGTGCCTCTAATGTTACTGGAGAATTGGCTTTTCGATGATGCTGCACCTCAGTGCAACGAAGATCTCATGAACATGTCACTAGGGGAAAGTACAGATGGGTTGTTCTAG 960 0.4615 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRLVPSNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKMQSEGDDEGNNYEKGKSCSQLKGQWERRLQTDIHTAKQALCEALSLDKPTQIFPETKLPSTSSQCFHDHHHPTSPSQTSLYASSTENIARLLDNWMKKSPKKTETNYSISNMVTTGSSSSEGTQSTVTCTQDHLDSLWSFKSERSRSVSAEENTNLVESKPNLETQVPLMLLENWLFDDAAPQCNEDLMNMSLGESTDGLF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03133 319 FunFam Transcription factor MYB30 68 126 - -
Phac9g03133 319 CDD SANT 69 112 IPR001005 -
Phac9g03133 319 CDD SANT 16 61 IPR001005 -
Phac9g03133 319 Gene3D - 69 135 - -
Phac9g03133 319 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac9g03133 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac9g03133 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac9g03133 319 SMART sant 66 114 IPR001005 -
Phac9g03133 319 SMART sant 13 63 IPR001005 -
Phac9g03133 319 FunFam MYB-related transcription factor 13 66 - -
Phac9g03133 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 243 - -
Phac9g03133 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac9g03133 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac9g03133 319 Gene3D - 13 66 - -
Phac9g03133 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Phac9g03133 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03133 Phac-Chr9 30580799 30582662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03133 1 319 MYB Transcription Factor Family AT5G62470 50.000 1.45e-108 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g03133 Myb_DNA-binding 7.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03133 K09422 - gmx:100807020 539.65