Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03125 ATGCGGGAGGAAGTGGTTTTATCTGTTGTTGATCCTCTTCTTATAGCATCTTCACCTTTGCAACCCCAGCATGGTGGTGATGCCGGAGATTCACTCATTGAGGGTGCTACTCATGTCAATGATGTTGGGGAATGTGATACTTTAGAAGAACAGGAACAAGAACAAGAACAAGAAAAAGACCTTACTCAAATGGTGGAGTGTCGCATTTGCCAGGAAGATGATACTCTTCAAAATTTGGACATACCCTGTGCATGCAAGGGAACCTTGAAGTTTGCTCATAGGGAATGTGTTCAGCTATGGTGTTACGAGAAGGGTGATACAATTTGTGAGATCTGCCACCAGCCATTCAAACCTGGCTATTCTGTGACAACAACTGTCATCCATCCTGGAGATACTTCAATTGATATCAGTGATGACTGGGCAAGCTATACTTTTCCTTTAGATTTGCACAATTCTCGCCTTTTGGCTATTGCAGCTGTAGAGCACCAAGTTCCGGAGACTGGTGAAGATTATGCCTATGCTGCTGGCACTGGTGGAATTACATTATGGCACTCTGTTGGTCTAATTGTAAGCGTTTTCAATTTCTTCATGAAGCTCAACAGTATGTTTTTCAGATGTTTTATATTAGGCATGAGAGTTCAATATTCTTAA 651 0.4194 MREEVVLSVVDPLLIASSPLQPQHGGDAGDSLIEGATHVNDVGECDTLEEQEQEQEQEKDLTQMVECRICQEDDTLQNLDIPCACKGTLKFAHRECVQLWCYEKGDTICEICHQPFKPGYSVTTTVIHPGDTSIDISDDWASYTFPLDLHNSRLLAIAAVEHQVPETGEDYAYAAGTGGITLWHSVGLIVSVFNFFMKLNSMFFRCFILGMRVQYS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03125 216 SUPERFAMILY RING/U-box 65 117 - -
Phac9g03125 216 ProSiteProfiles Zinc finger RING-CH-type profile. 59 119 IPR011016 GO:0008270
Phac9g03125 216 SMART ringv_2 66 113 IPR011016 GO:0008270
Phac9g03125 216 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 197 IPR033275 -
Phac9g03125 216 Coils Coil 45 65 - -
Phac9g03125 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 118 IPR013083 -
Phac9g03125 216 CDD RING_CH-C4HC3_MARCH 67 113 - -
Phac9g03125 216 Pfam Protein of unknown function (DUF3675) 118 192 IPR022143 -
Phac9g03125 216 Pfam RING-variant domain 67 112 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03125 Phac-Chr9 30467702 30472654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03125 66 113 C3H Transcription Factor Family AT2G37950 41.176 6.34e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03125 - - vra:106756822 275.789