Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g03125 | ATGCGGGAGGAAGTGGTTTTATCTGTTGTTGATCCTCTTCTTATAGCATCTTCACCTTTGCAACCCCAGCATGGTGGTGATGCCGGAGATTCACTCATTGAGGGTGCTACTCATGTCAATGATGTTGGGGAATGTGATACTTTAGAAGAACAGGAACAAGAACAAGAACAAGAAAAAGACCTTACTCAAATGGTGGAGTGTCGCATTTGCCAGGAAGATGATACTCTTCAAAATTTGGACATACCCTGTGCATGCAAGGGAACCTTGAAGTTTGCTCATAGGGAATGTGTTCAGCTATGGTGTTACGAGAAGGGTGATACAATTTGTGAGATCTGCCACCAGCCATTCAAACCTGGCTATTCTGTGACAACAACTGTCATCCATCCTGGAGATACTTCAATTGATATCAGTGATGACTGGGCAAGCTATACTTTTCCTTTAGATTTGCACAATTCTCGCCTTTTGGCTATTGCAGCTGTAGAGCACCAAGTTCCGGAGACTGGTGAAGATTATGCCTATGCTGCTGGCACTGGTGGAATTACATTATGGCACTCTGTTGGTCTAATTGTAAGCGTTTTCAATTTCTTCATGAAGCTCAACAGTATGTTTTTCAGATGTTTTATATTAGGCATGAGAGTTCAATATTCTTAA | 651 | 0.4194 | MREEVVLSVVDPLLIASSPLQPQHGGDAGDSLIEGATHVNDVGECDTLEEQEQEQEQEKDLTQMVECRICQEDDTLQNLDIPCACKGTLKFAHRECVQLWCYEKGDTICEICHQPFKPGYSVTTTVIHPGDTSIDISDDWASYTFPLDLHNSRLLAIAAVEHQVPETGEDYAYAAGTGGITLWHSVGLIVSVFNFFMKLNSMFFRCFILGMRVQYS* | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g03125 | 216 | SUPERFAMILY | RING/U-box | 65 | 117 | - | - | |
Phac9g03125 | 216 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 59 | 119 | IPR011016 | GO:0008270 | |
Phac9g03125 | 216 | SMART | ringv_2 | 66 | 113 | IPR011016 | GO:0008270 | |
Phac9g03125 | 216 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 1 | 197 | IPR033275 | - | |
Phac9g03125 | 216 | Coils | Coil | 45 | 65 | - | - | |
Phac9g03125 | 216 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 118 | IPR013083 | - | |
Phac9g03125 | 216 | CDD | RING_CH-C4HC3_MARCH | 67 | 113 | - | - | |
Phac9g03125 | 216 | Pfam | Protein of unknown function (DUF3675) | 118 | 192 | IPR022143 | - | |
Phac9g03125 | 216 | Pfam | RING-variant domain | 67 | 112 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g03125 | Phac-Chr9 | 30467702 | 30472654 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g03125 | 66 | 113 | C3H Transcription Factor Family | AT2G37950 | 41.176 | 6.34e-07 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g03125 | - | - | vra:106756822 | 275.789 |