Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03120 ATGCTCGAAAATAAGGACCCCGCAATTAGGCTCTTTGGCCAGAAGATTGCCTTTTCCGGAGAACCCGACGCTCGGACCATTGCCGCCGCCGAAATCGCCTCGCCGCCGCCGCCGATGGATGTTGTCAGAGACGCTGAAGAAGAAGAAGAAGAAGATGACGACGTTGCTGACTCAGACGCTGAAGATGATGAGAACAAAGACAAGGATCCTCCAGAAGAAGTTAGTGAGAAAACGAAAGAATCTGATCTTCCTCCAAATGCTGCAGACTGTAAGAAGACCCCAGAGGGTATTCAGAATCCAAACACACCTTCTATAGACGAAGAATCTGCAAAGTCAAAATCCAACAAGTCAGAAAACGATCAAACCGATCCCACAACAGCTTCTGCCACTACTACCAACTCTCAAGACAACAATAATAAAGCGCTGAAAAAACCAGACAAAATTCTTCCATGTCCTCGCTGCAATAGCATGGACACCAAGTTCTGTTACTACAACAACTACAATGTGAACCAACCACGTTACTTCTGCAAAGCGTGCCAAAGGTACTGGACCGCCGGGGGCACCATGCGAAACGTGCCGGTGGGTGCAGGGAGGAGAAAGAACAAAAACTCAGCCTCTCACTATCGCCATATCACAATCTCTGAAGCACTCCAAGCTGCAAGAATCGATTCCCCAAACGGGACTCATCTTTTGAAGCCCAATGGGAGAGTCCTCAGCTTTGGTTTAGACCCTCCAATTTGTGATTCCATGGCATCGGTCCTCAACCTCGCAGAGAAGAAAACAAGAAACGGGTTTCACTCCAACGAGGATCAAAGAAACAAAGATGATGATTGCTCAAGTGCATCATCCATTACCGTTTCCAATGAAGAAAGTGGGAAAAGCACGTCACAAGAATCACTGGTGCCAAACAACAACGGTTTCATACATCATCATCATCACCATGTTCCGTGCATCTCCACTGTTCCTTGGGCTTATCCTTGGAATTCCGGGGTTCCCTCACCACCTGCTTTGTGCCCTCCAGGGTTTCCCATGTCATTCTACCCTCATGCATTTTGGAATATTCCATGGTTTCCCACACACTCACAGAACCATGCTGCTCCAGCTCCAAGGTCTCCGGGTTCTGGTCCAAATTCTCCTACTCTTGGGAAACACTCGAGGGACGATGATGTGGCGAGGCAAGAGCATCTGCACGAGGAACCTTCGAGGCAGAGAAACGGATCTGTCTTGGTGCCCAAAACTTTGAGAATCGATGACCCCAGTGAGGCTGCAAAGAGTTCTATATGGGCAACTTTAGGGATCAAGAACGAGTGTGTGAGTGGGGCTGGCATGTTCAAGGGGTTCCAATCAAAGAAAGATGAGAAGGACCGTGTCGTTGAAACCTCTCCTGTGTTGAGGGCCAACCCTGCAGCCTTGTCTAGATCCCTTAACTTTCATGAGAACTCTTGA 1446 0.4848 MLENKDPAIRLFGQKIAFSGEPDARTIAAAEIASPPPPMDVVRDAEEEEEEDDDVADSDAEDDENKDKDPPEEVSEKTKESDLPPNAADCKKTPEGIQNPNTPSIDEESAKSKSNKSENDQTDPTTASATTTNSQDNNNKALKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIDSPNGTHLLKPNGRVLSFGLDPPICDSMASVLNLAEKKTRNGFHSNEDQRNKDDDCSSASSITVSNEESGKSTSQESLVPNNNGFIHHHHHHVPCISTVPWAYPWNSGVPSPPALCPPGFPMSFYPHAFWNIPWFPTHSQNHAAPAPRSPGSGPNSPTLGKHSRDDDVARQEHLHEEPSRQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVSGAGMFKGFQSKKDEKDRVVETSPVLRANPAALSRSLNFHENS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03120 481 MobiDBLite consensus disorder prediction 43 69 - -
Phac9g03120 481 MobiDBLite consensus disorder prediction 278 304 - -
Phac9g03120 481 ProSitePatterns Zinc finger Dof-type signature. 151 187 IPR003851 GO:0003677|GO:0006355
Phac9g03120 481 MobiDBLite consensus disorder prediction 264 305 - -
Phac9g03120 481 PANTHER CYCLIC DOF FACTOR 2 4 481 IPR045174 GO:0003700|GO:0006355
Phac9g03120 481 MobiDBLite consensus disorder prediction 382 402 - -
Phac9g03120 481 MobiDBLite consensus disorder prediction 70 86 - -
Phac9g03120 481 ProSiteProfiles Zinc finger Dof-type profile. 149 203 IPR003851 GO:0003677|GO:0006355
Phac9g03120 481 Pfam Dof domain, zinc finger 146 203 IPR003851 GO:0003677|GO:0006355
Phac9g03120 481 MobiDBLite consensus disorder prediction 27 147 - -
Phac9g03120 481 MobiDBLite consensus disorder prediction 119 139 - -
Phac9g03120 481 MobiDBLite consensus disorder prediction 363 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03120 Phac-Chr9 30389314 30393126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03120 1 479 C2C2-Dof Transcription Factor Family AT3G47500 46.881 2.36e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac9g03120 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03120 - - gsj:114409713 701.049