Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03111 ATGCAGCAGCTACAGTCACACTTTAATTTCTCCATCTCACAAACATATACATACATACATAGTCATACCCCTTTCTCACTCAGACACACACCTACTCTACACTTTTTCACCCTTCTTTTCCCAACTCCTCATATGGGAAGAACTCCTTGCTGCAGTCACGAGGAACTCAGAAAAGGTGCATGGACAGCTCAAGAAGATCAGAAACTCATTGCTTACATTCAGAATCATGGCACTGGAAGCTGGCGTACCTTGCCTCAGAAAGCTGGTCTTCAAAGATGTGGAAAGAGTTGCAGGCTGAGATGGTTTAACTACCTCAGACCAGACATTAAGAGAGGAAAATTGAGCCCAGAAGAAGAGCAGAAAATTATAAAACTTCAGGCTGTTCTTGGCAACAGGTGGTCAAGTATTGCAAAGCATTTACCAATGCGAACTGATAACGAAATCAAGAACTATTGGAACTCATATCTGAAAAGGCACTACGAAAAGAATGATGTGGATCCATCGAGTTCAAAACCAATTAGCACTGCAAGTTCCACAGAATCAAAATCCAGTGAGTTGTGCATGGTTCCATCAAAAGAAACTGTTTGCCATGGACCAAATGCCACTACACACCAATCTAATCACTCAAGCTTACCAAAGTCAATGTCAACTTCAACTCAGCTTCTCAACAAAGTTGCTAGTAAAATTCTTGCATCTGGGTACTTAGAAGCAACTAAATCATATAAACTTGTTGCTGCTGGGAACAGCAACAGTAATAGTGTGGTTAAAACTGGAACTGGAATAGAATCGGAGAATAACAGAGACCCCCTTGTGCCTAATATGGCCTCATCAAATCAATCAGTAACTTCTGCTCAGTTACTGAACAAGATGGCTACTTCACTCCCTCATAAAGTTCATGGCCTTGAATCTGCAAAAGCTGTTTTTTCAAAATTGTTGGACAGTAGTGAAAAAGGTGAGAGTGGTAGTGATGGTAGCTTTATTAGCAGTGATGAAATTGGAGATTGTTTGAATGCTCTAAGCCCTTTTCAGGATGCACCACACATAACAGAAATGGCAGGGTCCCCTTCTAGTCCTTCACTGATATTCAATCAAGTGGCCACACCCTCATGCTTTTCAAACAATAATGAAGATAATTGGCAATGCGTTTCATCTAACTATGTGTCCTTCAAATATTGTGCTCCAAGTGGTGGTGGTGACTGCAGTGTGTCTGAACTCAACTTGGGTGAGTCTTCTAGTTCAACATCGTGCTTCCTGTTTGAGAATGCTGATCTTGGAACGTGTGATGATGAAATAAGCAAGTACATTCAGTATTTGTAA 1317 0.41 MQQLQSHFNFSISQTYTYIHSHTPFSLRHTPTLHFFTLLFPTPHMGRTPCCSHEELRKGAWTAQEDQKLIAYIQNHGTGSWRTLPQKAGLQRCGKSCRLRWFNYLRPDIKRGKLSPEEEQKIIKLQAVLGNRWSSIAKHLPMRTDNEIKNYWNSYLKRHYEKNDVDPSSSKPISTASSTESKSSELCMVPSKETVCHGPNATTHQSNHSSLPKSMSTSTQLLNKVASKILASGYLEATKSYKLVAAGNSNSNSVVKTGTGIESENNRDPLVPNMASSNQSVTSAQLLNKMATSLPHKVHGLESAKAVFSKLLDSSEKGESGSDGSFISSDEIGDCLNALSPFQDAPHITEMAGSPSSPSLIFNQVATPSCFSNNNEDNWQCVSSNYVSFKYCAPSGGGDCSVSELNLGESSSSTSCFLFENADLGTCDDEISKYIQYL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03111 438 Gene3D - 113 186 - -
Phac9g03111 438 FunFam MYB-related transcription factor 57 110 - -
Phac9g03111 438 CDD SANT 60 105 IPR001005 -
Phac9g03111 438 Pfam Myb-like DNA-binding domain 58 105 IPR001005 -
Phac9g03111 438 Pfam Myb-like DNA-binding domain 111 156 IPR001005 -
Phac9g03111 438 CDD SANT 115 156 IPR001005 -
Phac9g03111 438 MobiDBLite consensus disorder prediction 163 215 - -
Phac9g03111 438 SUPERFAMILY Homeodomain-like 56 152 IPR009057 -
Phac9g03111 438 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 45 262 - -
Phac9g03111 438 Gene3D - 58 110 - -
Phac9g03111 438 MobiDBLite consensus disorder prediction 196 215 - -
Phac9g03111 438 ProSiteProfiles Myb-like domain profile. 53 105 IPR001005 -
Phac9g03111 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 105 IPR017930 -
Phac9g03111 438 SMART sant 110 158 IPR001005 -
Phac9g03111 438 SMART sant 57 107 IPR001005 -
Phac9g03111 438 ProSiteProfiles Myb-like domain profile. 106 156 IPR001005 -
Phac9g03111 438 MobiDBLite consensus disorder prediction 167 188 - -
Phac9g03111 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 160 IPR017930 -
Phac9g03111 438 FunFam MYB transcription factor 113 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03111 Phac-Chr9 30239943 30242572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03111 45 172 MYB Transcription Factor Family AT5G15310 68.750 7.16e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g03111 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03111 K09422 - gmx:100775267 603.979