Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03105 ATGGAGCCTGGTGAGGAGATTAATTTGAATATAGAAAGTGGTGGTGGAAATAATGGGAAGAGTGGTGATGGGTTCATTGATAGAAGCAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAACAGTTCTCAAGAGGTTTTCACACTTCTTTTGAGGTGTTCTTATCAGGTGACCTTAGTAAAATCGCCGAGACAGGTAATTGACGCACTGAATGCAGAGGGGCAACATATAGATATCATACTGGCTGAACTTGACCTTCCAACAAAAAAGGGCATGAAGATGTTGAAGTACATAGCACGGGATAAAGAGTTTCGCAGAATCCCTGTTATAATGATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCTGCTGACTATCTAGTAAAGCCCTTACGTACTAATGAACTATTAAATTTGTGGACGCATATGTGGAGACGGAGGCGCATGCTTGGACTCGTAGAGAAGAACATCTTGAGTTATGAGTTTGATATTGTAGCATCAGACCCCAGTGATGCCAATACAAACAGTACCACCCTGTTCTCTGATGACACAGATGACAAGTCGAAGAGAAGCAACAATCCAGAGGTGGGATTACCAGTCCAACAAGAGCAAGAGTCTTCTATTGCAATTGGTGCTGCTGTTGAGGAACCTCTAGATGCTCATCCATCAGAACACAGGCCTGATGTGGATGGATTTAATGATCACCGAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTTTTCACGTATGTTAAAGCATCTATACTGAAGAGCAACTTTGAAGGGGTTGTTAATGCAGACAACAATGATGCTGCACATGTGAGGATGGAAGCTATGCATCAAGCATGTGCTCAACAAGGGGTGAATGACCTTCAAACACGTGAAAATGGAGAGACCTGTGAAAGTCAATCGCAAGATGACTTACCCAGCTGCAGTAGTGTACCTGATTCTCTCTCTATTGAAAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACCGCAAAAGCACAAGGATAAAAATTTCCATCAGGGTGTGATGCATCCAAGAAATGGGACTCATTGTTCTGAGCATGAAGTATCTGGCATGGCTTCCCAACATACTTATCCATATTATATTTCAGGAGGTTTTAATCATGTTATGATGCCTTCATCTGCACAAATGTATCACCAAAAGAATATGCAGGACCTACAGAATCATCATAGTGCAGCTATGATTGCTCAATACAGTCATCTTCCCCAAGGTGGTCCCCACGGAACGGGGATGGCATCTTTCCCATACTACCCGATGAGTATATGCTTACAACCTGGTCAGGTTCCTCAACCCCATTCATGGCCATCATTTGGAAGCTCAAGTTCATCAGAAGCAAAAATAAGTAAAGTTGACAGGAGAGAAGCAGCACTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGGCTTGCTGAAAGGCGACCTCGAGTGAGGGGACAGTTTGTCAGAAAATTAAACGGCGCCAATATGGATCTCAATGGACAGCCTGCATCAATAGACTATGATGAAGATGATGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCTGAGGATGCTTGA 1683 0.4337 MEPGEEINLNIESGGGNNGKSGDGFIDRSKVRILLCDNDSNSSQEVFTLLLRCSYQVTLVKSPRQVIDALNAEGQHIDIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYEFDIVASDPSDANTNSTTLFSDDTDDKSKRSNNPEVGLPVQQEQESSIAIGAAVEEPLDAHPSEHRPDVDGFNDHRTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNADNNDAAHVRMEAMHQACAQQGVNDLQTRENGETCESQSQDDLPSCSSVPDSLSIERSCTPPASMEVSPQKHKDKNFHQGVMHPRNGTHCSEHEVSGMASQHTYPYYISGGFNHVMMPSSAQMYHQKNMQDLQNHHSAAMIAQYSHLPQGGPHGTGMASFPYYPMSICLQPGQVPQPHSWPSFGSSSSSEAKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGANMDLNGQPASIDYDEDDEEDEDDQGARDSSPEDA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03105 560 MobiDBLite consensus disorder prediction 310 353 - -
Phac9g03105 560 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 334 IPR045279 GO:0009736
Phac9g03105 560 SUPERFAMILY CheY-like 27 156 IPR011006 -
Phac9g03105 560 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Phac9g03105 560 MobiDBLite consensus disorder prediction 179 211 - -
Phac9g03105 560 MobiDBLite consensus disorder prediction 536 560 - -
Phac9g03105 560 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Phac9g03105 560 Gene3D - 31 227 - -
Phac9g03105 560 ProSiteProfiles CCT domain profile. 480 522 IPR010402 GO:0005515
Phac9g03105 560 MobiDBLite consensus disorder prediction 310 346 - -
Phac9g03105 560 SMART REC_2 31 146 IPR001789 GO:0000160
Phac9g03105 560 Pfam CCT motif 480 522 IPR010402 GO:0005515
Phac9g03105 560 MobiDBLite consensus disorder prediction 523 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03105 Phac-Chr9 30147181 30153051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03105 20 559 Response Regulator Gene Family AT5G61380 50.238 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac9g03105 Response_reg 2.7e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03105 K12127 - gmx:100799728 967.222