Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03104 ATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCTGCTGACTATCTAGTAAAGCCCTTACGTACTAATGAACTATTAAATTTGTGGACGCATATGTGGAGACGGAGGCGCATGCTTGGACTCGTAGAGAAGAACATCTTGAGTTATGAGTTTGATATTGTAGCATCAGACCCCAGTGATGCCAATACAAACAGTACCACCCTGTTCTCTGATGACACAGATGACAAGTCGAAGAGAAGCAACAATCCAGAGGTGGGATTACCAGTCCAACAAGAGCAAGAGTCTTCTATTGCAATTGGTGCTGCTGTTGAGGAACCTCTAGATGCTCATCCATCAGAACACAGGCCTGATGTGGATGGATTTAATGATCACCGAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTTTTCACGTATGTTAAAGCATCTATACTGAAGAGCAACTTTGAAGGGGTTGTTAATGCAGACAACAATGATGCTGCACATGTGAGGATGGAAGCTATGCATCAAGCATGTGCTCAACAAGGGGTGAATGACCTTCAAACACGTGAAAATGGAGAGACCTGTGAAAGTCAATCGCAAGATGACTTACCCAGCTGCAGTAGTGTACCTGATTCTCTCTCTATTGAAAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACCGCAAAAGCACAAGGATAAAAATTTCCATCAGGGTGTGATGCATCCAAGAAATGGGACTCATTGTTCTGAGCATGAAGTATCTGGCATGGCTTCCCAACATACTTATCCATATTATATTTCAGGAGGTTTTAATCATGTTATGATGCCTTCATCTGCACAAATGTATCACCAAAAGAATATGCAGGACCTACAGAATCATCATAGTGCAGCTATGATTGCTCAATACAGTCATCTTCCCCAAGGTGGTCCCCACGGAACGGGGATGGCATCTTTCCCATACTACCCGATGAGTATATGCTTACAACCTGGTCAGGTTCCTCAACCCCATTCATGGCCATCATTTGGAAGCTCAAGTTCATCAGAAGCAAAAATAAGTAAAGTTGACAGGAGAGAAGCAGCACTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGGCTTGCTGAAAGGCGACCTCGAGTGAGGGGACAGTTTGTCAGAAAATTAAACGGCGCCAATATGGATCTCAATGGACAGCCTGCATCAATAGACTATGATGAAGATGATGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCTGAGGATGCTTGA 1350 0.4378 MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILSYEFDIVASDPSDANTNSTTLFSDDTDDKSKRSNNPEVGLPVQQEQESSIAIGAAVEEPLDAHPSEHRPDVDGFNDHRTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNADNNDAAHVRMEAMHQACAQQGVNDLQTRENGETCESQSQDDLPSCSSVPDSLSIERSCTPPASMEVSPQKHKDKNFHQGVMHPRNGTHCSEHEVSGMASQHTYPYYISGGFNHVMMPSSAQMYHQKNMQDLQNHHSAAMIAQYSHLPQGGPHGTGMASFPYYPMSICLQPGQVPQPHSWPSFGSSSSSEAKISKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGANMDLNGQPASIDYDEDDEEDEDDQGARDSSPEDA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03104 449 Pfam CCT motif 369 411 IPR010402 GO:0005515
Phac9g03104 449 MobiDBLite consensus disorder prediction 199 242 - -
Phac9g03104 449 Gene3D - 1 117 - -
Phac9g03104 449 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 182 423 IPR045281 GO:0009909
Phac9g03104 449 MobiDBLite consensus disorder prediction 199 235 - -
Phac9g03104 449 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Phac9g03104 449 MobiDBLite consensus disorder prediction 68 100 - -
Phac9g03104 449 MobiDBLite consensus disorder prediction 425 449 - -
Phac9g03104 449 ProSiteProfiles CCT domain profile. 369 411 IPR010402 GO:0005515
Phac9g03104 449 MobiDBLite consensus disorder prediction 412 449 - -
Phac9g03104 449 SUPERFAMILY CheY-like 1 45 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03104 Phac-Chr9 30147181 30153051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03104 1 448 Response Regulator Gene Family AT5G61380 45.065 1.94e-125 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac9g03104 CCT 2e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03104 K12127 - gmx:100799728 780.4