Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03095 ATGGCTCTCTTCCGAAGGTTCTTTTACCGGAAACCACCAGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCCAAAAATGTGTTGGAGGAAGAGGAGTACAAGGTTTATATTGGAGGGGTTGTGGCTCAGCTTCAGGATCACTATCCGGATGCTTCTTTCATGGTGTTCAATTTCAGAGAAGGGGATAGGCGAAGTCGAATTTCAGACATAATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCCCTTTTGCCATTGGAGATGATTCACCACTTCCTTCGGTCAAGTGAGAGCTGGTTGTCTTTGGAGGGAAAACAAAACGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCTGTGCTTGCGTTTATGCTAGCTGCTCTTCTGTTGTACAGGAAACAGTACAATGGGGAACACAAGACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTCTCCACCTTCTATCCCCTTTGAATCCACAACCTTCTCATTTGAGATATCTTCAGTACATTTCCAGGAGGCATTTGGGTTCTCAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGCATTATTGTGAGGGTCCTTCCATTGTTTGACGGTGGAAAAGGATGCAGACCGCTTGTGCGTGTCTATGGCCCAGACCCTTCAAAACCTTCCAACAGAAGTTCTAAGCTTCTTTCCTCAACTTCAATGGGCCAAAATCATGTTCGCCACTACTTGCAGGCAGAATGTAGGCTCGTGAAAATTGACATCCGTTGTCATGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGACTTTGTTCGTGAGGAGGTGATGTTCAGAGTCATGTTTCATACTGCGTTTGTAAGGTCAAATATATTGACGCTGAGCCGTGATGAAATTGATATTCAGTGGGATGCAAAGGATCAGTTCCCCAAGGACTTCAAATTTGAGGTGCTTTTTTTGGACGCTGATACTGTTATACCTAATCTAAACACAGAAGATGCAAGTGACACAGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCGGAAGAGATCTTCAGCAATGTAATCGATGCTATGGAAGGTAAGGGAGATTACGATTTTCCAATGGTCCATGACAGTGTAGTAGATGATGGAAGTCATAAAGAGGTCTGGAAAGAGTATTCAGATCCTCGTACTTTTCTGGATTCCCTGTTAGATGATGGGATTCACCAACAGGTTGATGATGCAAGGTACAAGCTTGACAAGAGGGTGGTTTTAGATACTCATGCTGTCAAAGATATTGGAGTGGATTATGGAATAACTTTTATGACAAAGGGAGTCACTGTGAATGCTCATGATAAGTTGGCAGTTATGCAAAACAAATATGATGAAGATAACAATGAAACAGAAGAAGGGTTGCAGGTGCTTCATATTTCTAGACCAAAATCGGATAAATTACTTATTTCTTCTGAAAAGAAACAACTTCCTACAAACTCAAAGCCCATGGGCGATTCAGTTGTAGCAAACCAAAAGACTAAACACCAAGAACCACATGGTTTTCAGGCAAATCATGCAAAACTCAATGCAACAACTAGGTCGGTTCCTTCTAGTAAGGATTCTTTTCAAGATTCCATGCATTTCTCATATCCACCATCAAGGAACAATAGTTCACCACTTACATTGTCACATGTTACCTCTGAAAAGGACGAAACCATTGATGCCAAAGGAAAATCTACTTCTAGTTCTCATGTCTCTGAAGCAATTGTTTTTATGGACACGATAAATGATCTGAAAAGCTGTGATGGTGATAACTCAAAATCTTCAGACACTGTAATAGAAATAGGCTCAAACTCTCCACTATCATCATTACTGTCAGTCAAAGAGACATATCTTCAGTTAGCTAATCAAGCACCACAACAGAGCTATGATCAAATGTTACAACTTCCTCCACCTCCACCTCCACCTCCTCCTCCTCCAATTTTTGGGCAAAATAGAGGGAGCTTTATGACTCCTACCCATTGGAAATCTGTTGGACAAAATAATGGGGCTTTACCTCCTTCTCCCCCTACTCCTCCCACTGCAAATGGTGTAATTACATCTAAAGTTTCACTACCACCACCACCACCTCCTCCTCCTCCCCCTCCTTTGCAGTCTACAAATGGAGCTCCATTCCCTTCTCCCTCAATGTCTCCAACAAAGTTTAAAGCTCCACCTCCTGCACCACCACCACCACATTATCCTCCACCTCCTTTAAGTAAATCTACACCACTTCCTCCTCCTCCTTCCAGTAATGCTCCACCAGCACCACCACCTCCTCCTCCTTTAAGTACTGCTCCACCACCACCACCTCCTCCTCCTTCTCTATCCAGAGCTTCACCTCCACTTCTTCCTCCATCAAGTGCAGCACCACCTCCACCACCATCTTCTTCACTGTCCAGAGCTCCACCTCCCCCACCTCCACCAAATCGTGGACCACCACCAACAACAATGCCTGGAGGCACAACTCCTCCACCACCTCCAGGTGGTCGAGGCCCACCTCTTACTGGAATGCGGGCTCCTCTTTCTCATTCTCCTCATGGACCTCTAGGTGGTGCTCCTTTTCCTTCACCAATTGGAACTGATACAAGAGGGAGAGGTCGAGGACTTGGACGTCCTACAGGGGCTGGTGCCATGGCAACTCGGAAATCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGATGAACTACAAAGACGTGGAGAACTTCAAATAACACAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTGCAAAACCTGCTGATTCAGATGGTAAATCTGGTGGGCGGCGCAAATCCGTTGGATCCAAAACTGACAAAATCCAATTGATTGACCTAAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCTCTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGATTCAGTGCTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCGACCAAAGAGGAGATAGAGCTTTTAAAGGGATACACCGGTGATAAGGAGAATTTGGGGAAGTGTGAAAAGTATTTTTTGGAGCTGATGAAAGTGCCAAGAGTGGAGTCAAAACTTAGAGTATTCTCTTTCAAAATTCAGTTTGGGACTCAGATTACAGAGTTCAAGAAGAGCTTACACACAGTAAACTCTGCTTGTGAAGAGGTCCGAAACTCATTCAAACTAAAGGAGATCATGAAGAAAATTCTTTATTTGGGTAATACATTGAACCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTAGATAGTCTCTTAAAACTAACCGACACTCGTGCTTCAAATAGTAAAATGACACTCATGCATTTTCTTTGCAAGGTCCTAGCTGAAAGATTTCCTGGACTCCTTGATTTTCACCTTGACCTTGTTAGCTTGGAAGCAGCCACTAAGATACAATTGAAGTCTTTAGCAGAAGAAATGCAAGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGAAAACGATGGCCCCGTGACTGAAGTTTTTCGTAAGACATCGAAGGAATTCATTGCTGTTGCAGGGTCAGAGGTGGCATCTGTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCCCTATATTTCGGTGAGGATCCTGCCCGTTGTCCTTTCGAGCAAGTTACTGCAACTCTCTTGAATTTCACAAGGTTGTTTCTGAAGGCACATGAAGAGAATTGCAAACAAACAGTGTTAGAGAAAAAGAAAGCTGATAAAGAGGCTGAAATGGAGAAGGCTAAAGGCATTAACTTCATAAGGAAGAGTGGAAAAGATGAAGAAGAAGAAAGTTGA 3960 0.4343 MALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKVYIGGVVAQLQDHYPDASFMVFNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGKQNVLLMHCERGGWPVLAFMLAALLLYRKQYNGEHKTLEMVYKQAPRELLHLLSPLNPQPSHLRYLQYISRRHLGSQWPPSETPLYLDCIIVRVLPLFDGGKGCRPLVRVYGPDPSKPSNRSSKLLSSTSMGQNHVRHYLQAECRLVKIDIRCHVQGDVVLECIHLSDDFVREEVMFRVMFHTAFVRSNILTLSRDEIDIQWDAKDQFPKDFKFEVLFLDADTVIPNLNTEDASDTECASPEAEEFYEAEEIFSNVIDAMEGKGDYDFPMVHDSVVDDGSHKEVWKEYSDPRTFLDSLLDDGIHQQVDDARYKLDKRVVLDTHAVKDIGVDYGITFMTKGVTVNAHDKLAVMQNKYDEDNNETEEGLQVLHISRPKSDKLLISSEKKQLPTNSKPMGDSVVANQKTKHQEPHGFQANHAKLNATTRSVPSSKDSFQDSMHFSYPPSRNNSSPLTLSHVTSEKDETIDAKGKSTSSSHVSEAIVFMDTINDLKSCDGDNSKSSDTVIEIGSNSPLSSLLSVKETYLQLANQAPQQSYDQMLQLPPPPPPPPPPPIFGQNRGSFMTPTHWKSVGQNNGALPPSPPTPPTANGVITSKVSLPPPPPPPPPPPLQSTNGAPFPSPSMSPTKFKAPPPAPPPPHYPPPPLSKSTPLPPPPSSNAPPAPPPPPPLSTAPPPPPPPPSLSRASPPLLPPSSAAPPPPPSSSLSRAPPPPPPPNRGPPPTTMPGGTTPPPPPGGRGPPLTGMRAPLSHSPHGPLGGAPFPSPIGTDTRGRGRGLGRPTGAGAMATRKSSLKPLHWSKVTRALQGSLWDELQRRGELQITQEFDVSEIEKLFSANVAKPADSDGKSGGRRKSVGSKTDKIQLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEIELLKGYTGDKENLGKCEKYFLELMKVPRVESKLRVFSFKIQFGTQITEFKKSLHTVNSACEEVRNSFKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHFLCKVLAERFPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIRGLEKVKQELAASENDGPVTEVFRKTSKEFIAVAGSEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFTRLFLKAHEENCKQTVLEKKKADKEAEMEKAKGINFIRKSGKDEEEES* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03095 1319 MobiDBLite consensus disorder prediction 536 577 - -
Phac9g03095 1319 Gene3D Protein tyrosine phosphatase superfamily 13 206 IPR029021 -
Phac9g03095 1319 SUPERFAMILY Formin homology 2 domain (FH2 domain) 977 1303 - -
Phac9g03095 1319 Coils Coil 1276 1296 - -
Phac9g03095 1319 Coils Coil 1182 1209 - -
Phac9g03095 1319 MobiDBLite consensus disorder prediction 657 674 - -
Phac9g03095 1319 MobiDBLite consensus disorder prediction 523 591 - -
Phac9g03095 1319 MobiDBLite consensus disorder prediction 714 733 - -
Phac9g03095 1319 MobiDBLite consensus disorder prediction 677 695 - -
Phac9g03095 1319 PANTHER FORMIN-J 806 1299 - -
Phac9g03095 1319 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Phac9g03095 1319 SMART it6_source 662 1319 IPR015425 -
Phac9g03095 1319 SMART PTEN_C2_2 198 338 IPR014020 -
Phac9g03095 1319 MobiDBLite consensus disorder prediction 655 908 - -
Phac9g03095 1319 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Phac9g03095 1319 Gene3D Formin, FH2 domain 901 1286 IPR042201 -
Phac9g03095 1319 ProSiteProfiles Formin homology-2 (FH2) domain profile. 900 1301 IPR015425 -
Phac9g03095 1319 Pfam Formin Homology 2 Domain 905 1275 IPR015425 -
Phac9g03095 1319 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Phac9g03095 1319 MobiDBLite consensus disorder prediction 742 858 - -
Phac9g03095 1319 Gene3D - 207 336 - -
Phac9g03095 1319 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03095 Phac-Chr9 30065090 30082891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03095 1 581 FH2 protein (formin) Gene Family AT5G07740 59.835 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03095 - - pvu:PHAVU_009G184800g 1397.88