Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03092 ATGACCCACTTTTGTTGGTGTTGTTATTATTATTTTACCTTTCAAGATGAACTCAGTAATGTGTGGGCCATAAGAGTGATGAAAGTAAAGAGGAAGTGTCAGAGGTGGGGAGGAACCGTAACAGTAGGAGAGATGAAGTTGAAGAAAAGAAGATCTAGAAAGATAGGGCAGGGAACGTATAGCAGTGTGTTTCGAGCGAGGGAGCTTGAGACGGGGAAGATAGTGGCATTGAAGAAGGTGCGGTTCGACAATTTTGAACCGGAGAGTGTGCGGTTCATGGCGCGTGAGATATTGATTCTGCGACGCCTTGATCATCCCAATATAATAAAGCTTGAGGGCTTGATTACTTCGAGGCTCTCCTGTAGCATTTACCTCGTCTTTGAGTACATGGAGCATGACATCACAGGGCTCTTGTCTTCCCCTGATATCAAATTCACTGAACCACAGATTAAGTGCTACTTGAAGCAGTTGTTGGCTGGTCTTGAGCACTGTCACCTGCGGGGAGTAATGCATAGGGATATTAAGGGGTCGAATCTTTTGGTAAACAATGAAGGGGTTTTGAAGGTAGCGGATTTTGGGTTGGCGAATTATGTCAATTCTGGGCACAGGCAACCTCTGACTAGTCGTGTTGTTACCTTGTGGTACCGGCCGCCGGAGCTTTTGCTCGGTTCCACGGACTATGGTCCGGCCGTGGATCTTTGGAGTGTTGGCTGTGTGTTTGCGGAGCTGCTTGTTGGGAAGCCTATACTTCAGGGGAGAACGGAGGTTGAACAATTGCACAAAATTTTTAAGCTATGTGGCTCCCCACCTGATGAATACTGGAAAAAGACTAGACTTCCTCATGCAACGTTATTTAAGCCTCAGCAACCATATGATAGTTGCCTTCGACAATCCTTTAAAGATTTGCCTGCGACCAGTGTACATCTGCTACAAACTCTTCTTTCTGTAGAACCATACAAACGTGGGACTGCTACATCTGCTCTCTCGTCGGAGTATTTCAAAACAAAACCTTATGCGTGTGACCCATCAAGCTTGCCGATATACCCACCTAGCAAGGAAATCGATGCAAAACACAGGGAAGAGTCAAGGAAAAAGGTTAGTGGACGAGTTCGTGGAACTGAAACAAGAAAACCATCCAGAAAGCCACTGGGATTCAGTAAACTAGCCCCAGCAGAGGATTTGGCAAGTCAAACTCAGACTTCCCAGAAGGTCAATGGTAGATCTTTCCGCAACCATGAAGAAGAGAAGATTAAAACAGGTGACAAAGCACAGAAGTCATCCAGTGGTAAAGCTGAAGATGCTTCCCATATGAAGAATGCTTCTCAAGGAGATATTCCCCTTTCTGGACCATTACAAGTTTCATCATCAAGTGGATTTGCATGGGCAAAAAGCCGAAAAGATGACGCCTCATTTCGATCCCATTGTCGAACTATTTCACGAGGACATATTTTCAATCCATCAGAACAACCTTCTACATTAAATTCAAGGAATAATTTGGATACCACAAACCAGGAAAATAAAGAGTTTTGTGGGGGATGCGTCAATTCTAGGGGCCAGCAGCTGCTTGAAATTTCTAAGCTTTCAATGCAGAATCAGTGGAGTAAGTTTGATCGCCCAGATTCATTTGATGCTTCGGATGAGTACCATTCACAAGAACTGTCTATGGCCCTTTATCACAGAGAAGATTCAGCATCCAAGAGAAATAACCTGAGTTTTCAAGATCAAGGAGAAAGGGTTGAATTTTCTGGGCCCCTGCTATCTCAGATGCACACTGTTGATGAGCTCTTGGAAAGGCATGAACGTCACATCCGGCGAACTGTCCGGAGATCATGGTTTCAGAGAGGTAAGAAGTCAAGGAAGTAA 1863 0.4471 MTHFCWCCYYYFTFQDELSNVWAIRVMKVKRKCQRWGGTVTVGEMKLKKRRSRKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREILILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSSPDIKFTEPQIKCYLKQLLAGLEHCHLRGVMHRDIKGSNLLVNNEGVLKVADFGLANYVNSGHRQPLTSRVVTLWYRPPELLLGSTDYGPAVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQPYDSCLRQSFKDLPATSVHLLQTLLSVEPYKRGTATSALSSEYFKTKPYACDPSSLPIYPPSKEIDAKHREESRKKVSGRVRGTETRKPSRKPLGFSKLAPAEDLASQTQTSQKVNGRSFRNHEEEKIKTGDKAQKSSSGKAEDASHMKNASQGDIPLSGPLQVSSSSGFAWAKSRKDDASFRSHCRTISRGHIFNPSEQPSTLNSRNNLDTTNQENKEFCGGCVNSRGQQLLEISKLSMQNQWSKFDRPDSFDASDEYHSQELSMALYHREDSASKRNNLSFQDQGERVEFSGPLLSQMHTVDELLERHERHIRRTVRRSWFQRGKKSRK* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03092 620 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Phac9g03092 620 FunFam probable serine/threonine-protein kinase At1g54610 44 131 - -
Phac9g03092 620 MobiDBLite consensus disorder prediction 392 406 - -
Phac9g03092 620 Pfam Protein kinase domain 51 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03092 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phac9g03092 620 CDD STKc_CDK9_like 50 333 - -
Phac9g03092 620 Gene3D Transferase(Phosphotransferase) domain 1 132 371 - -
Phac9g03092 620 MobiDBLite consensus disorder prediction 344 454 - -
Phac9g03092 620 MobiDBLite consensus disorder prediction 407 432 - -
Phac9g03092 620 MobiDBLite consensus disorder prediction 352 381 - -
Phac9g03092 620 Gene3D Phosphorylase Kinase; domain 1 45 131 - -
Phac9g03092 620 SMART serkin_6 49 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03092 620 ProSiteProfiles Protein kinase domain profile. 49 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03092 620 FunFam probable serine/threonine-protein kinase At1g54610 132 372 - -
Phac9g03092 620 PANTHER CELL DIVISION PROTEIN KINASE 52 337 - -
Phac9g03092 620 SUPERFAMILY Protein kinase-like (PK-like) 53 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03092 Phac-Chr9 30037294 30045952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03092 54 392 Core Cell Cycle Gene Families AT5G10270 48.451 3.77e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phac9g03092 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03092 - - var:108332003 1078.54