Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03090 ATGAGTTTTGCTAAAACAAGAAAAAGAACACAGAGCACAAGAAAAGAAGGAGGATCATTATTAATGTCAGAGCAGGAAACCGATTCATGGGGCTTCCTGTTTGTCTGTTTCTTGATCCTCTTCTCAGGTAAATTAGTTGTTGGGGATTCGTTGGACACTGACGCAAAGGTTCTGCTGAAGCTGAAATCTTATTTGCAAGCCCAAACTCTTGCAAATAGAGGAGGGTACATAAGCTGGAACAGTAGCAGTTCAAATCCTTGTGATTGGTATGGAATCGATTGCAGTCTCGTGGATGGGAGAACAAGGAGGGTTGTGAAAGTAGACATCTCTTACAGTGACATATATGGTAACATATTCGATGGCTTCTCTAATCTCACTGAGCTCAGACACCTTGACATCTCTTGGAACTCTCTATCTGGGGGGATTCCTGAGGACTTGAGGATGAGCCACAAGCTTGTGTATCTCAATCTCTCCCATAATACTCTCGAGGGGGAGTTGAATCTAAAGGGATTGACTCAGTTGCAAACAGTGGACTTGTCTGTTAATAGGTTCCATGGGGAACTTGGGCTGAGTTTCCCTGCCATTTGTGACAGTTTGGTGACTTTAAATGTTTCAGATAATCACTTGAGTGGTGGGATTCATGGCTTCTTTGATCAATGCTTGAGGCTGCAGTACTTGGATTTGAGCACCAACCATCTAAATGGGACCTTGTGGACTGGATTTTCCAGGTTGAGACAGTTTTCAATCTCAGAGAATTTTCTAACTGGGGTTGTTCCTCCCCAGGCTTTTCCAGTAAACTGTAGCATTGAAAATCTGGACCTTTCAGTGAATGGATTTGTTGGTAAGGCCCCCAAGGAGTTGTCTAACTGCAAGAATTTAGTGGTTCTCAACCTTTCTAGTAACAATTTCACTGGAGATATTCCCCGTGAAATTGGTTCCATTTCTGGTCTTGAGGGATTGTTCTTGGAGAACAATACTTTCTCAAGGGATATCCCAGAGACCCTTTTGACCTTAACCAATTTGTTCATCTTGGATTTGAGCAGAAACAAATTTGGTGGGGAGGTGCAGGAGATTTTTGGGAAATTCAAGCAACTGAAGTTTCTTGTGCTGCACTCAAATTCTTACACTGGAGGGTTGAACTCATCAAGCATATTTACATTGACAAACCTTAGCCGCTTGGACTTAAGCTTTAATAATTTTTCTGGTCCATTACCTGTTGAAATCTCACAAATGTCTGCACTCGCTTTCTTAACCTTAACCTACAACCAGTTCTCTGGACCTATTCCTTCTGAATTGGGAAAGTTGACTCGCCTTATGGCACTTGATCTTGCCTTCAACAGTTTCAGTGGACCGATCCCACCAAGCCTTGGAAACTTGAGTTCTCTCTTATGGCTAACACTTTCAGATAATTCATTAACCGGAGAAATCCCACCAGAGTTGGGAAACTGCTCAAGCATGTTATGGCTAAACCTTGCGAACAACAAACTATATGGAAAAATTCCTTCCGATCTAACAAGAATTGGAAGGAATGCAAGGGCCACATTTGAATCAAATCAAAAGAATCTCGGGGGAGTTGTTGCTGGCAATAGTGAGTGCTTAGCAATGAAGAGATGGATACCTGCTGATTACCCTCCGTTCAGCTTTGTGTATAACATCCTGACAAGGAAGAATTGTAGGGCCCTTTGGGACAGGTTGCTCAAAGGATATGGTATCTTCCCCATGTGTACATCTGAGAACTCTGCTAGATCATCACACATAGCAGGGTATCTTCAGCTAAGTGGGAACTATTTGAGTGGTGAGATTCCTTCAGAGATTGGGACCATGGTAAACTTTAGCATGTTGCATTTGGGAGATAACAAGTTCACGGGGAAATTCCCTCCAGGGATGGTAGGTTTACCACTTGTAGTCTTGAACATGACCAGAAACAATTTTTCTGGTGAAATTCCAAGTGATATTGGCAACATGAAGTGTTTACAGGATCTTGATTTGTCTAGGAACAATTTCTCTGGAACATTTCCCATAAGTCTGGCACACTTGGATGAGCTTAGCAGGTTCAACATCTCATACAATCCCCTCATATCTGGTACAGTCCCACCATCTGGACACTTACTCACTTTTGACAAGGATTCATATTTGGGTGACCCCCTCTTGAGCCTCCCAAAGTTCTTTAACATCTCTGATGATAGAAATAACACTTTACACAGAGTCTTGAAAAATCCCACAAAATGGTCTTTGGTTTTGGCTCTAGGACTGACTATCGTGGTCTTTGGACTTCTTTTCCTTGTGATATGTTTCTTGGTGAAAAGTCCATCTGTGGAACCAGGATACCTCATGAAGAATATAAAGAAGCAAACACATGATTCAGGCAGCTCCGGATCCTCACCATGGTATTCTGACACAGTTAAGATATTCCACCTGAACAAGACAGTCTTCACACATGCTGATATCTTGAAAGCAACCTCCAACTTCACAGAGGAGAGAGTCATAGGAAGGGGTGGCTATGGAACAGTATATAGAGGGTCATTTCCAGATGGGAGAGAGGTGGCGGTGAAGAAGCTCCAAAGGGAAGGAACTGAGGGTGAAAAAGAATTCAGAGCTGAAATGAAGGTTCTAAGTGGTCATGGATTTAGCTGGCCTCATCCAAACCTTGTCACACTGTATGGTTGGTGCCTCTATGGTTCACAGAAGATACTCGTTTATGAGTACATAGGAGGTGGAAGCTTGGAGGAACTTGTGACTGATACAAAAAGATTGAGATGGAGAAGGCGCCTAGAAGTGGCAATTGATGTGGCCAGGGCACTTGTCTATTTACACCATGAGTGCTACCCTTCTATTGTGCATAGAGATGTGAAGGCTAGTAACGTGTTGCTAGACAAGAATGGGAAGGCCAAGGTCACAGACTTTGGACTTGCTAGGATTGTTGATGTTGGAGACAGTCATGTGAGCACTATAGTGGCTGGCACAGTGGGCTATGTTGCACCAGAATATGGACAAACATGGAAAGCCACCACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGGTTATGGAGCTAGCAACTGGGAGAAGAGCAGTGGATGGAGGGGAAGAGTGTTTGGTGGAATGGACTAGGCGTGTTATGATGGGTTCTGGAAGACAAGGGTTAGCTCAATCTGTGCCAGTTTTGTTGAAGGGAAGTGGGGTGGTTGAGGGTGCTAAGGAGATGGGTGACTTGCTCCAAGTTGGAGTGAAATGCACACATGACGCACCACAGGCTAGGCCTAACATGAAGGAGGTTCTAGATATGCTTATTAAGATATATGATACCACTGGGGACTCAAATTATGGATACCTTGTGTAG 3339 0.4349 MSFAKTRKRTQSTRKEGGSLLMSEQETDSWGFLFVCFLILFSGKLVVGDSLDTDAKVLLKLKSYLQAQTLANRGGYISWNSSSSNPCDWYGIDCSLVDGRTRRVVKVDISYSDIYGNIFDGFSNLTELRHLDISWNSLSGGIPEDLRMSHKLVYLNLSHNTLEGELNLKGLTQLQTVDLSVNRFHGELGLSFPAICDSLVTLNVSDNHLSGGIHGFFDQCLRLQYLDLSTNHLNGTLWTGFSRLRQFSISENFLTGVVPPQAFPVNCSIENLDLSVNGFVGKAPKELSNCKNLVVLNLSSNNFTGDIPREIGSISGLEGLFLENNTFSRDIPETLLTLTNLFILDLSRNKFGGEVQEIFGKFKQLKFLVLHSNSYTGGLNSSSIFTLTNLSRLDLSFNNFSGPLPVEISQMSALAFLTLTYNQFSGPIPSELGKLTRLMALDLAFNSFSGPIPPSLGNLSSLLWLTLSDNSLTGEIPPELGNCSSMLWLNLANNKLYGKIPSDLTRIGRNARATFESNQKNLGGVVAGNSECLAMKRWIPADYPPFSFVYNILTRKNCRALWDRLLKGYGIFPMCTSENSARSSHIAGYLQLSGNYLSGEIPSEIGTMVNFSMLHLGDNKFTGKFPPGMVGLPLVVLNMTRNNFSGEIPSDIGNMKCLQDLDLSRNNFSGTFPISLAHLDELSRFNISYNPLISGTVPPSGHLLTFDKDSYLGDPLLSLPKFFNISDDRNNTLHRVLKNPTKWSLVLALGLTIVVFGLLFLVICFLVKSPSVEPGYLMKNIKKQTHDSGSSGSSPWYSDTVKIFHLNKTVFTHADILKATSNFTEERVIGRGGYGTVYRGSFPDGREVAVKKLQREGTEGEKEFRAEMKVLSGHGFSWPHPNLVTLYGWCLYGSQKILVYEYIGGGSLEELVTDTKRLRWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKNGKAKVTDFGLARIVDVGDSHVSTIVAGTVGYVAPEYGQTWKATTKGDVYSFGVLVMELATGRRAVDGGEECLVEWTRRVMMGSGRQGLAQSVPVLLKGSGVVEGAKEMGDLLQVGVKCTHDAPQARPNMKEVLDMLIKIYDTTGDSNYGYLV* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03090 1112 Gene3D Ribonuclease Inhibitor 585 732 IPR032675 -
Phac9g03090 1112 Gene3D Transferase(Phosphotransferase) domain 1 904 1108 - -
Phac9g03090 1112 MobiDBLite consensus disorder prediction 1 20 - -
Phac9g03090 1112 Pfam Protein kinase domain 823 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03090 1112 PANTHER LEUCINE RICH REPEAT KINASE 2 360 1103 - -
Phac9g03090 1112 SUPERFAMILY Protein kinase-like (PK-like) 801 1097 IPR011009 -
Phac9g03090 1112 SMART serkin_6 823 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03090 1112 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 903 1104 - -
Phac9g03090 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 945 957 IPR008271 GO:0004672|GO:0006468
Phac9g03090 1112 SUPERFAMILY L domain-like 115 502 - -
Phac9g03090 1112 Gene3D Phosphorylase Kinase; domain 1 790 902 - -
Phac9g03090 1112 FunFam Putative LRR receptor-like serine/threonine-protein kinase 362 524 - -
Phac9g03090 1112 FunFam Putative LRR receptor-like serine/threonine-protein kinase 193 262 - -
Phac9g03090 1112 Gene3D Ribonuclease Inhibitor 343 527 IPR032675 -
Phac9g03090 1112 Pfam Leucine rich repeat N-terminal domain 52 95 IPR013210 -
Phac9g03090 1112 Gene3D Ribonuclease Inhibitor 51 336 IPR032675 -
Phac9g03090 1112 ProSiteProfiles Protein kinase domain profile. 823 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03090 1112 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 263 355 - -
Phac9g03090 1112 SMART LRR_typ_2 338 361 IPR003591 -
Phac9g03090 1112 SMART LRR_typ_2 387 411 IPR003591 -
Phac9g03090 1112 SMART LRR_typ_2 125 149 IPR003591 -
Phac9g03090 1112 SMART LRR_typ_2 459 483 IPR003591 -
Phac9g03090 1112 CDD STKc_IRAK 829 1099 - -
Phac9g03090 1112 SUPERFAMILY L domain-like 589 713 - -
Phac9g03090 1112 ProSitePatterns Protein kinases ATP-binding region signature. 829 852 IPR017441 GO:0005524
Phac9g03090 1112 Pfam Leucine Rich Repeat 128 146 IPR001611 GO:0005515
Phac9g03090 1112 FunFam Leucine-rich repeat receptor protein kinase MSP1 785 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03090 Phac-Chr9 29985050 29989178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03090 87 1099 Receptor kinase-like Gene Family AT5G07280 32.340 3.33e-143 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Phac9g03090 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03090 - - gmx:100781769 1895.55