Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03075 ATGGATCCTCCTCTCATCACCGACTCCACATTCTCCCCCGCTTACACCCTCTCCGATATTTGGCTCCGAACACCCCCTTTTCCCCCCTCCGATCACCACTTCTCCAAGAATGATTCTGGTAGCAATAAACGGATGAAGGTGGAAGGGTCCAGCGTTGAAAATGATGGTTTCAAAGCTGAAGCAGAAACAAGTTCTGTGAGTGGTAACAAGTCAAGTGAACAAAGCACTATACCTTGTGAGGCACCTAAACAGGAATATATTCACGTGAGAGCAAGAAGGGGCCAAGCTACTGATAGCCACAGTCTAGCAGAAAGAGCAAGAAGAGAAAAAATCAGTGAGAGAATGAAAATTCTTCAGGATTTGGTTCCAGGGTGTAACAAGGTAAATGGTAAAGCACTGGTCCTAGATGAGATAATCAATTACATACAGTCGCTGCAGCGTCAGGTTGAGTTCCTGTCTATGAAGCTTGAAGCAGTTAATTCAAGGATGAACATGAGCCCTAACATAGATGGGTTGCCTTTAAAAGATGTTGGTGGTACTCCACGATTCGACATTGCTGGAATGGTATTTGGATCACAGGCAGCAAGAGGGTATGCTCAGGGATCACATCATGGATGGCTGCATATGCAGATAGGCGGTGGTTTGAGAGACCAGCATAATTCTGAGAAATCTCATTGGGAATGA 684 0.4532 MDPPLITDSTFSPAYTLSDIWLRTPPFPPSDHHFSKNDSGSNKRMKVEGSSVENDGFKAEAETSSVSGNKSSEQSTIPCEAPKQEYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVNGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNMSPNIDGLPLKDVGGTPRFDIAGMVFGSQAARGYAQGSHHGWLHMQIGGGLRDQHNSEKSHWE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03075 227 MobiDBLite consensus disorder prediction 26 82 - -
Phac9g03075 227 CDD bHLH_AtBPE_like 85 172 - -
Phac9g03075 227 Pfam Helix-loop-helix DNA-binding domain 99 146 IPR011598 GO:0046983
Phac9g03075 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 145 IPR011598 GO:0046983
Phac9g03075 227 FunFam Basic helix-loop-helix transcription factor 92 164 - -
Phac9g03075 227 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 38 201 IPR024097 GO:0006355
Phac9g03075 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 165 IPR036638 GO:0046983
Phac9g03075 227 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 131 227 - -
Phac9g03075 227 SMART finulus 101 151 IPR011598 GO:0046983
Phac9g03075 227 Coils Coil 142 162 - -
Phac9g03075 227 MobiDBLite consensus disorder prediction 36 55 - -
Phac9g03075 227 MobiDBLite consensus disorder prediction 57 79 - -
Phac9g03075 227 Gene3D - 92 169 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03075 Phac-Chr9 29842968 29846788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03075 40 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 70.290 2.20e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g03075 HLH 1.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03075 - - vra:106758689 374.785