Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03056 ATGTCTGCCGTCGGTGATGTTTTCATGCCGGAAGTGGGTGCCGGGGAGCTACACGTGCTTGCCGTTGATGACAGCCACGTCGACCGCAAGGTTATTGAACGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGAAAGTGGAAGCAGGGCCCTGCAGTATCTGGGGTTGGATGGAGAGAAGAGCTCCATTGGTTTTGATAGCGTCAAGGTTAATTTGATAATGACAGACTACTCCATGCCGGGGATGACAGGATATGAATTGCTCAAGAAGATAAAGGAATCATCTGTGTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAAGAGTTTCTGTTGAAACCTGTGAAGTTGTCAGATGTAAAACGCGTGACAGATTTCATCATGAAAGGTGAAGGGAAGAAAAGAGTAAAAAAAAGCCATAAAAGAAGTAGATCAGAAGATTGCACCCCTCCATCTATTTCAACTGCATTCTCATCAGTTTCTCATCCATGTGATGCATCATTGCCTGCATCGCCTTCTACATTTCACTCAAAGAAATCCAGATTGAGCATATAG 606 0.4505 MSAVGDVFMPEVGAGELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMKGEGKKRVKKSHKRSRSEDCTPPSISTAFSSVSHPCDASLPASPSTFHSKKSRLSI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03056 201 Gene3D - 17 175 - -
Phac9g03056 201 Pfam Response regulator receiver domain 19 138 IPR001789 GO:0000160
Phac9g03056 201 SUPERFAMILY CheY-like 16 145 IPR011006 -
Phac9g03056 201 ProSiteProfiles Response regulatory domain profile. 18 145 IPR001789 GO:0000160
Phac9g03056 201 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 156 IPR045279 GO:0009736
Phac9g03056 201 CDD REC_typeA_ARR 19 140 - -
Phac9g03056 201 SMART REC_2 17 141 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03056 Phac-Chr9 29741920 29744393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03056 17 167 Response Regulator Gene Family AT5G62920 75.000 1.45e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac9g03056 Response_reg 7.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03056 K14492 - gmx:100819165 321.242