Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03053 ATGTCTACCTCCTCAACCCACCACACCTATAGCCGAAAGCAGAAATCACTCGGCTTATTGTGCACCAATTTTCTGCGCCTCTACAACAGAGAAGGCGTTCGCTTAATTGGTCTCGATGACGCTGCCTCGCGATTAGGAGTTGAAAGACGCCGGATCTACGACATCGTCAACGTCCTAGAGAGCGTCGGGGTGCTGGCCAGAAAAGCTAAGAATCAGTATACCTGGAAAGGCTTTTCTGCAATTCCCGAGGCTTTGCAAGAACTCAAGGAAGATGGTTTGAAAGAGAACCCTGGGTCTTTTGATGACTCCAATGACAGCGCGAAAGTGTCTGATGATGAGGACGAGGAGGAAACTTCTCCCAATGTCAATACTGAAAGTCAGAATGACAAAGAAATTACTGATTCCGCCGCTCTTGCCCTATCTTCTAAGAATGAAAATAGAAGGGAAAAGTCTCTGGCATTGCTTACTCAGAATTTTGTCAAGCTTTTTATCTGCTCTAGTATTGAAATGATCTCCCTTGACGAAGCTGCAAAGTTGTTGCTTGGAAATGCTAATACATCAATAATGAGGACAAAAGTCAGACGCCTATATGATATTGCAAATGTGTTATCCTCCATGAACCTAATCGAGAAGACCCATACAACAAATACAAGAAAACCAGCATTTAGATGGTTGGGTTGGAGAGGGAAAGCATGGAGTGAATCAGTCGACTTCGCTCACAATTCAAGTGTCAACGAGCCAGGGAAAAGAAAGTTTGGAACTGACATCACAAACACAAGTTTTAAAAGGAGCAAGACTGATTTGCTCTTGGATGGCCAGACCTGTAAAATGCAAAATCAACGAGAAAATGTTAGTTACACTCAGCCGGAGAAAAGCTACTTAGAAAAAGATGCAAAACAGACTTCAAAGGGCTATCAGTTTGGTCCTTTCGCTCCAGCTTATGTGCCCAAAGTCGGAACCTCTGAAAGTAATAGTGGGAATCAGGTGCATGACTGGGACAGCCTCGCACAGATTCATCGTCCTCAGTATCAAAACCAAGCTTTGAGAGACTTATTCTCTCACTACATGGATGCATGGAAATCATGGTACTCTGAAGTTGCTGAGAAAAAGCCAACGAAAACATTATAA 1128 0.4344 MSTSSTHHTYSRKQKSLGLLCTNFLRLYNREGVRLIGLDDAASRLGVERRRIYDIVNVLESVGVLARKAKNQYTWKGFSAIPEALQELKEDGLKENPGSFDDSNDSAKVSDDEDEEETSPNVNTESQNDKEITDSAALALSSKNENRREKSLALLTQNFVKLFICSSIEMISLDEAAKLLLGNANTSIMRTKVRRLYDIANVLSSMNLIEKTHTTNTRKPAFRWLGWRGKAWSESVDFAHNSSVNEPGKRKFGTDITNTSFKRSKTDLLLDGQTCKMQNQRENVSYTQPEKSYLEKDAKQTSKGYQFGPFAPAYVPKVGTSESNSGNQVHDWDSLAQIHRPQYQNQALRDLFSHYMDAWKSWYSEVAEKKPTKTL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03053 375 SUPERFAMILY "Winged helix" DNA-binding domain 149 227 IPR036390 -
Phac9g03053 375 FunFam E2F transcription factor 8 7 79 - -
Phac9g03053 375 FunFam E2F transcription factor-like E2FE 142 228 - -
Phac9g03053 375 SUPERFAMILY "Winged helix" DNA-binding domain 11 75 IPR036390 -
Phac9g03053 375 Gene3D - 7 79 IPR036388 -
Phac9g03053 375 Gene3D - 141 228 IPR036388 -
Phac9g03053 375 PANTHER TRANSCRIPTION FACTOR E2F 5 344 IPR015633 GO:0000978|GO:0006357
Phac9g03053 375 SMART E2F_TDP_2 147 226 IPR003316 GO:0005667|GO:0006355
Phac9g03053 375 SMART E2F_TDP_2 12 77 IPR003316 GO:0005667|GO:0006355
Phac9g03053 375 Pfam E2F/DP family winged-helix DNA-binding domain 149 226 IPR003316 GO:0005667|GO:0006355
Phac9g03053 375 Pfam E2F/DP family winged-helix DNA-binding domain 13 77 IPR003316 GO:0005667|GO:0006355
Phac9g03053 375 MobiDBLite consensus disorder prediction 93 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03053 Phac-Chr9 29682845 29689651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03053 7 371 E2F-DP Transcription Factor Family AT3G48160 58.511 9.78e-131 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Phac9g03053 E2F_TDP 2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03053 K09391 - gmx:100818090 543.117