Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03031 ATGCATGCTACAGTACAGCCAGGTGGCCGTTCTCCTAAACCTATGAGTAGTCCAACATCAACATCACAGTTAAAATCTGCTTCAGATAGTGTCCAGAATAGTACTTCTTCCTTTCCATCTCACATTAAGGGGAGGAAAAGGGAAAGGGCAGATCAAGGCTCTGAGTCTGTCAAGCGAGAGCGATCAATAAAAGCTGAGGATGGGGATTCTGGCAATTTCAGGCATGATAATATTTTCAAGACAGAGATTGCAAAAATTACTGAGAAGGGAGGGCTTGTTGATGGTGAAGGAGTTGAAAAATTAGTGCAGCTGATGGTTCCTGATAGAAATGAGAAGAAGATAGATATAGCTAGCCGGTCATTGCTTGCAGCTGTCATTGCAGCAACAGATAAGTTAGATTGTCTTAGTCAGTTTGTGCAGCTAAGGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAGGGGAAGATTGGTGATGGTGATAAATCTGCTGAGGAATTTCTGTTGGTATTGCTTCGGGCACTTGACAAACTTCCAGTAAATCTTCAGGCTTTACAAACATGCAACATTGGAAAATCTGTGAATCATTTGCGAAGTCACAAAAACACTGAAATTCAGAGGAAAGCAAGAGGTTTAGTTGATACATGGAAGAAACGTGTTGAAGCAGAAATGAATATAAATGATGCAAAGTCTGGTTCAGGTCCCAATGTCCACTGGCCTGCCAAATCACGTCCTTCTGATGTTGGTCAAGGTGGGAATAGACATTCAGGTGCATCATCAGATGTTGGCATGAAGAGTTCAGTTACACAGCTTTCTGCTTCCAAAACTGCCTCTGTGAAGATTGTCCAGGGAGAGAATATTACTAGATCAGCATTGACATCTGCATTTCCAGGGCCTGCAAAATCAGCGCCGTCACCTGCAGCCGTGACTGCAAACTTAAAAGATGGGCAGCCTCGTATTGTTGCAGTCAATGGAGGTTCTGATCTTCCCATGGCAAATGCAAGGGATGAGAAAAGTTGTAGTTCTAGTCAATCTCACAACAACAGTCAATCTTGTTCTAGCGACCATGCTAAAACTGGAGGTCACTCAGTAAAGGAGGATGCCAGAAGCTCTACTGCAATGAGTGTGAATAAGATTTCTGGAGGCTCTTCACGACATCGAAAATCCATTAATGGATTTTCAGGTTCAACTCCATCTGGAGGGCAAAGGGAAACTGGATCAAGTAGGAATTCCTCCTTGCACAAAAATTCAACTACAGAGAAAATATCTCAACCTGGATTAATGGACAAGGCAGTTGATGGAACTTCTCTTGAGGGCAATATTCCAAAGCTGATTGTTAAGATTCCAAACCAAGGTAGAAGTCCTGCACAAAGTGTCAGTGCTGGTTCTTTTGATGATCCTACAATCATGAATAGTCGAGCCTCATCTCCTGTTCTTCCTGATAAGCATGATCAGTCTGATCACAGCCCAAAGGAAAAGAGCGACCTTTATCGAGTGAATATTGGCTCAGATATTAATACCGAATCTTGGCAGAGTAATGATTTTAAAGACGTATTGACTGGCTCTGATGAGGGTGATGGATCACCTGCTGCAGTTACTGATGAAGAGCACTGTCGTACTGCCAATGATTGTAAGAAGGCATTGGAGGTATCAAAAGCTGCTTCATCATCATCTGGAAATGAACATAAAGCTGGCAATGTGCAGGATGCTTCTTACAGCTCGATAAATGCTTTAATTGAAGGTGTTAAGTACTCTGAAGCCGATGATGGTGGAATGAATCTTCTTGCTAGTGTGGCTGCTGGAGAGATATTGAAATCTGAGTTGTTAACTCCGGCTGGATCTCCAGAAAGAAACACAACTGCTGTCGAGCAGTCATGCACAGACAATGGTGTTAATAAGTCCTCTGAAGAAAATCTTGTTCGGGATGAGTGCCACTCAAATAATGGTCTTGATGGTGAACATAAGAATCTGGGTTCTGTAACAGGTGATTTAGGGGCAAATGATGAAAGTGATTCTGATTTTCAAGCTTCTGGAGGTAAAGCTGCAAGAGAGCTAAATAAGCGTGTTAATGCATGTAGTATGGATTTGCAACAGGTTACTGAAACTACTTTGGAAAGCAAAGGAAAATTAAATGAAAAATCTGGACCTACTTCACTGGGTGGTCTTGCTGAAAATTCTGTGCAAGAAGCTGGCGATACTGACAGAAGCAAGCAGCTCCAGGAGGTTGTTCAGGGAGTGAATGCTGGCGAAACCCATGATAAGGTTAGTTGTGTTGCAGAAGTTGAGGCAGAAGCAGCTAAAAAATTGTTACATACAGCTGTGGAAGTGGATGCACAAAGTGATAACTGTACTGCTGAAGGATCAAGTGGCTGTGGACAGTTAGTTAAAAAGCCTCCTGCTATACTTGTGCAGTCTGATTTGGCAAGTGGAAAAGATGATAATGCACTCCATTCTTCTGGTTATAGTGTTGACGAGGTTCCTAAAGACTTCACTGATAGGGAATCTGAGAAAACTGATGATGTTGATGCTGAGAATCATGTCAGTCAGTCTAAAAATAGAAGAAATGAGTCTGAAAGTGATGCCTTGACTAGGCCTGAGAATAAAAGTTTATGTTCTATTGTGACTGGTCTTGTTGCTGAACATGTGGAGGAGAATTTAGAAGCGAAAGAGGTTCGTGATCAACCTGCTAGAGAGAATCCTCCTGAAGATTCACCTAGTGTTCGTTCACAAGAAATAGATAAGCATCTTGATTCCAAAAGATTAAAATTGACTTCCACAGAAACAGAGGAGGCTGAGGAGTGTACCTCTACCACTGCAGATGCTTCTTCCATGTCTGCTGCAGCTGTGTCAGATGTGGATGCAAAGGTTGGATTTGATTTAAATGAAGGGCTCAATGCCGATGATGGAAGATGTGAGTTCAACAGCATTGTCACTTCTGGATGTACACCTGCAGGTCAATTGATCAGTCCTGTGCCATTTCCTGCTTCATCTATGTCTGGTATTCTTGCTCCAGTTACTGTGGCGTCTGCTGCTAAGGGGCACTTTGTACCTCCGGAAGATTTATTGAGAAGTAAAGGGGAAATTGGTTGGAAGGGATCAGCTGCCACCAGTGCATTCAGGCCAGCCGAACCCAGGAAAGTTATGGAAATGCCTCTTGGTACATCAGCTACCCCTATTGCTGATGCTCCAGCTGGAAAGCAGAGTCGAGCACCATTGAATATTGACTTGAATGTGGCCGATGAAAGAATACTTGATGATATTTCTTGTGCACGACACACAAATTCTATATCTCTTGCAACTGATTGTCATGATCCTGTATGCAGTAAGATACCTTCACCTGTTCGCAGCTCTGGAGGGCTTGGTCTTGACTTGAACCAAGCGGACGATGCTTCTGATATTGACATTTGCTTGAGTAGTAATCATAAAATTGATGTGCCAACTATGCAGGGGAAGTCATCATTGGGTGGTCCACCAAATAGAGAAGTGAATGTCCACAGGGACTTTGATTTGAACAACGGACCTTCTGTTGATGAAGTTACCACTGAATCCTCATTCTTCTCTCAGTATGCCAGGAGCAGTGTGCCATCTCAATTACCTGTTTCTGGACTTAGAGTGACTACTGCTGAGCCAGGCAACTTCTCTTGGCTTCCTTCCAGTGGCAACACCTATTCTGCTGTTACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAGTTGTTGCTCCAAATGGGCCACAAAGGTTGCTGACTCCTGCTGCTGGTGGCAATCCATTTGGACCAGATATTTATAGGGCTCCTGTATTGTCATCTTCTCCTGCAGTGTCGTATCCATCTGCTCCATTTGAATATCCTGTCTTCCCTTTTAACTCCAGCTTCCCTCTCCCATCAGCTTCTTTTTCTGCTGGATCAACTGCTTATGTATATCCAACATCTGCCAATCGGCTTTGCTTCCCTGCAGTAAATTCACAGTTAATGGGGCCTGCTGGCACGGTTTCATCTCATTACCCCAGGCCTTATGTTGTTGGTCTTACAGAAGGTAGCAATAGTGGTAGTGCTGAGACCAGTAGAAAATGGACAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGGTGTTCAGACATGGAAGGGAGAGATGAGAGTTCGCCTCTTCCATCTAGGCAACTTTCTGTTGCTAGTTCACAGGCCCTAGCTGAGGAGCAAGCAAGGATCCAGCTCGCAGGTAGTGTTCGCAAGAGAAAGGAGCCTGATGGTGGGTGGGATGGCTACAACCAATCCTCATGGCAATAG 4302 0.4375 MHATVQPGGRSPKPMSSPTSTSQLKSASDSVQNSTSSFPSHIKGRKRERADQGSESVKRERSIKAEDGDSGNFRHDNIFKTEIAKITEKGGLVDGEGVEKLVQLMVPDRNEKKIDIASRSLLAAVIAATDKLDCLSQFVQLRGLPVFDEWLQEVHKGKIGDGDKSAEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRSHKNTEIQRKARGLVDTWKKRVEAEMNINDAKSGSGPNVHWPAKSRPSDVGQGGNRHSGASSDVGMKSSVTQLSASKTASVKIVQGENITRSALTSAFPGPAKSAPSPAAVTANLKDGQPRIVAVNGGSDLPMANARDEKSCSSSQSHNNSQSCSSDHAKTGGHSVKEDARSSTAMSVNKISGGSSRHRKSINGFSGSTPSGGQRETGSSRNSSLHKNSTTEKISQPGLMDKAVDGTSLEGNIPKLIVKIPNQGRSPAQSVSAGSFDDPTIMNSRASSPVLPDKHDQSDHSPKEKSDLYRVNIGSDINTESWQSNDFKDVLTGSDEGDGSPAAVTDEEHCRTANDCKKALEVSKAASSSSGNEHKAGNVQDASYSSINALIEGVKYSEADDGGMNLLASVAAGEILKSELLTPAGSPERNTTAVEQSCTDNGVNKSSEENLVRDECHSNNGLDGEHKNLGSVTGDLGANDESDSDFQASGGKAARELNKRVNACSMDLQQVTETTLESKGKLNEKSGPTSLGGLAENSVQEAGDTDRSKQLQEVVQGVNAGETHDKVSCVAEVEAEAAKKLLHTAVEVDAQSDNCTAEGSSGCGQLVKKPPAILVQSDLASGKDDNALHSSGYSVDEVPKDFTDRESEKTDDVDAENHVSQSKNRRNESESDALTRPENKSLCSIVTGLVAEHVEENLEAKEVRDQPARENPPEDSPSVRSQEIDKHLDSKRLKLTSTETEEAEECTSTTADASSMSAAAVSDVDAKVGFDLNEGLNADDGRCEFNSIVTSGCTPAGQLISPVPFPASSMSGILAPVTVASAAKGHFVPPEDLLRSKGEIGWKGSAATSAFRPAEPRKVMEMPLGTSATPIADAPAGKQSRAPLNIDLNVADERILDDISCARHTNSISLATDCHDPVCSKIPSPVRSSGGLGLDLNQADDASDIDICLSSNHKIDVPTMQGKSSLGGPPNREVNVHRDFDLNNGPSVDEVTTESSFFSQYARSSVPSQLPVSGLRVTTAEPGNFSWLPSSGNTYSAVTISSIMPDRGDQPFSVVAPNGPQRLLTPAAGGNPFGPDIYRAPVLSSSPAVSYPSAPFEYPVFPFNSSFPLPSASFSAGSTAYVYPTSANRLCFPAVNSQLMGPAGTVSSHYPRPYVVGLTEGSNSGSAETSRKWTRQGLDLNAGPGCSDMEGRDESSPLPSRQLSVASSQALAEEQARIQLAGSVRKRKEPDGGWDGYNQSSWQ* 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03031 1433 MobiDBLite consensus disorder prediction 704 737 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 251 266 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 637 652 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 613 682 - -
Phac9g03031 1433 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 97 226 IPR035441 -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 228 266 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 368 426 - -
Phac9g03031 1433 CDD TFIIS_I 158 223 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 338 360 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 704 726 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 1350 1366 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 909 931 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 1387 1404 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 482 498 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 10 40 - -
Phac9g03031 1433 Pfam TFIIS helical bundle-like domain 173 222 IPR017923 -
Phac9g03031 1433 ProSiteProfiles TFIIS N-terminal domain profile. 145 225 IPR017923 -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 517 539 - -
Phac9g03031 1433 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1433 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 828 865 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 1 71 - -
Phac9g03031 1433 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 236 IPR035441 -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 812 869 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 295 436 - -
Phac9g03031 1433 SMART TFS2_5 151 224 IPR003617 GO:0005634
Phac9g03031 1433 MobiDBLite consensus disorder prediction 1350 1433 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 41 71 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 888 942 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 450 498 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 614 636 - -
Phac9g03031 1433 MobiDBLite consensus disorder prediction 453 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03031 Phac-Chr9 29385330 29393175 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Phac9g03031 Med26 1.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03031 - - gmx:100788512 2281.52