Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03029 ATGAGTGTAAAACTCATCTGGGCATTCTTCATTGCAATCTTTTTGTTTCTTCTACTGGCCAATTCAGAAGAACAAGAGGTGATCAATGCCCTAGTCACATTCATGGATAAATTGGCACCAGGGTATGTACCAAGAGACCCTACGTGGGGTTGGAACGTTTCATCAGATCCCTGCAAAGATAAGTGGCACGGTGTGAGGTGCCACTCAGATAACAAATACGTTATGAGTGTGACTCTTGAGAAGTTGAATTTTGGTGGAAGTTTAGACGCCGGTTCTCTTTGCATTGCAAAGTCTCTTCAAATGCTTAGCCTAAAGGACAACACTTTACATGGTTCGATATCAGAGGATATAGGAAAGTGCAAGTTATTGACTCACTTGTTTTTAAGTGGGAACCAATTCTCTGGGGACCTTCCTATTTCTATTGCCAAGCTAAGTAACATGAAACGGCTTTATATTTCGGACAACCACTTAACTGGAGAGCTTCCTAACATGGTTCATGTTTCAAGTTTGATATCCTTCGTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTAGTTATGACTTCTCCAACCTTGAAGAGTTTAATGTCTCTAACAACAATTTACATGGTCAAGTTCCTGATCTCAGAGGCAAATTCCATGCAGACAGCTTTTCTGGGAATCCTAACTTATGTGGGGAACCACTTTCAAATGCATGTCCTCCTCCACCACCACCACCAGAAAAGGACAAAAAATCGTTCCCTAATGATTTGTCCATTTATTCAGGTTACCTAGTCCTTGGTTTAATTACGCTGATTTTCTTGACCTTTAAACTGTTATGTAGGTTCAAGACCAAAGAAAAAGAATTGGAAGTTGAAAAGAAGGAAAAGGCACAAGAAAGTGTTGGTATTGTTGCCAAGACTTGTGAAATATCCAATTCCAATGGATCAAAGAATGGCACTGGGATCAGATCCGAGTATTCGTTGACATCTTTGGAAAGTGGGATGACAACATCAGGTCTTGTTCTTCTTTCAAGTCGAACCCTCAGAGGATTGCAATTTGAGGACTTGCTTGGTGCTCCTGCTGAATTGATTAGGAGGGGAAAGCATGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGCTGTTGGCAGTGAAGAGGATTAAGGATTGGGGGATTCCTAAGCAAGATTTTCAGAGAAGGATGAATTTGATAGCCCAGGTGAAGCATCCACACGTATTGCCACCTGTTGCATACTATTGTTCTCAGCAAGAGAAGCTCCTAGCATATGAATATATGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGTAAGCAGACTAAATGTTGCTGCTAAGATTGCTGAGGCTTTGACATATATGCATGAGGAGTTTCTTGAGAATGGAATAGCACATGGTAACTTAAAGTCAAACAACATTTTGTTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGGTTGCAGAAAATCAAGATCAATTTGTCATTTCGCACAACAAAGGCCTCAAAAGCAAAGATCTAATTGCAGCCACCTTCAAAGCTGATGTATACTCCTTCGGTATGATTCTTCTCGAGCTGTTGTCAGGGAAAGTAAATAAAAATGATGGATTTGATCTAGTTAAATGGGTGAATTCAGTGGTCAGAGAGGAATGGACCATCGAAGTTTTTGATAAGTCGCTAATCTCACAGGGTGCTTCGGAAGAGAGGATGATGAATTTGTTGCAGGTAGCATTAAAATGCTTAAATCCTTCTCCAGATGATAGGCCAAGCATGAGCCAAGTTGTTGTGATGACAAATGCTTTGATAGAGGAGGAAGAGAAATCCATATCCTTTGACACATGA 1881 0.4088 MSVKLIWAFFIAIFLFLLLANSEEQEVINALVTFMDKLAPGYVPRDPTWGWNVSSDPCKDKWHGVRCHSDNKYVMSVTLEKLNFGGSLDAGSLCIAKSLQMLSLKDNTLHGSISEDIGKCKLLTHLFLSGNQFSGDLPISIAKLSNMKRLYISDNHLTGELPNMVHVSSLISFVAQNNNFTGEIPSYDFSNLEEFNVSNNNLHGQVPDLRGKFHADSFSGNPNLCGEPLSNACPPPPPPPEKDKKSFPNDLSIYSGYLVLGLITLIFLTFKLLCRFKTKEKELEVEKKEKAQESVGIVAKTCEISNSNGSKNGTGIRSEYSLTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGIPKQDFQRRMNLIAQVKHPHVLPPVAYYCSQQEKLLAYEYMQNGSLFMLLYGSQSGHSFDWVSRLNVAAKIAEALTYMHEEFLENGIAHGNLKSNNILFDKNMDPCISEYGLMVAENQDQFVISHNKGLKSKDLIAATFKADVYSFGMILLELLSGKVNKNDGFDLVKWVNSVVREEWTIEVFDKSLISQGASEERMMNLLQVALKCLNPSPDDRPSMSQVVVMTNALIEEEEKSISFDT* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03029 626 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Phac9g03029 626 SUPERFAMILY Protein kinase-like (PK-like) 356 610 IPR011009 -
Phac9g03029 626 PANTHER OS05G0588300 PROTEIN 9 614 - -
Phac9g03029 626 Gene3D Phosphorylase Kinase; domain 1 341 426 - -
Phac9g03029 626 Pfam Protein kinase domain 358 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03029 626 Gene3D Transferase(Phosphotransferase) domain 1 427 625 - -
Phac9g03029 626 Gene3D Ribonuclease Inhibitor 188 236 IPR032675 -
Phac9g03029 626 SUPERFAMILY L domain-like 51 229 - -
Phac9g03029 626 MobiDBLite consensus disorder prediction 226 246 - -
Phac9g03029 626 FunFam Leucine-rich repeat receptor protein kinase EMS1 90 186 - -
Phac9g03029 626 ProSiteProfiles Protein kinase domain profile. 352 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03029 Phac-Chr9 29364564 29367195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03029 48 608 Receptor kinase-like Gene Family AT1G48480 33.887 8.88e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac9g03029 Pkinase 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03029 - - pvu:PHAVU_009G180700g 1176