Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03024 ATGACTGATCCGGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCGTCTGAACACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCGAAAAGGGACAAAGTATCTGGCAGATGGTGCTTCAGTTATGATGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTCCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGATCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTGATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCGACTTTTCTGCGTAAGCGTTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTCTGGACGGACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGCCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCAAACAAAGTCAGAGAAATCCACGAACAATTTAAGGGCAAAAAGATTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTCATGGCCATAGAACAACTCCTGCAGCAATATCCGGAAATGCAAGGTGAAATAGTACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGACGTTGACAATGCAAAGGAGGAGGCTTACATTACTTCCAAAAGGATAAATGACAGGTTTGGTTTAGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTGCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGTGACGGTTTAAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTGCTAAAATGGATGAAGCCTTAGAAATTGCTTCTGACTCCCCCCGTATAAGTGCACTTGTTGTTTCTGAGTTTATAGGCTGCACACCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCAGTAGCCGAAGCACTAAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCACTACAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAGAAGCTTTGAGCAAGATTTAGTGTTTTCGTGCAAGGATCACCATAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCCCTTTCTCCTAGTTTCAGGAGGCTATCCATAGACCAAATTGTCCCAGCATATAAAAGGAGCAGTTGCAGAGCAATCTTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTGAAAGCCCCCAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAAGTTCATTGAGTGAATGGTTTGATCAGTGTGAGGATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAGCATGCTAGTTGGGAAATGAGTCATGCAGATACGGATTTTGCATGGAAAAGGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCCTCTGTAGAGAGCAAAGAGAGTGCCTTGGTATGGCATTACTGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGATGGATCACCTTGAAAATGTACTTGCGAATGAGCCTGTTGTTGTGAAAAAAGGACAACATATTATCGAAGTCAAGCCTCAGGTCATACTTATCTCTTCTCACCTCAAGTTATTATTTTTCTCAAAATCTGATATTGACTAA 2229 0.415 MTDPVIISHGDGKQSNDDDSGVFSSEHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPPELYKQFHDGFCKQHLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHEQFKGKKIILGVDDMDIFKGVSLKFMAIEQLLQQYPEMQGEIVLIQILNPPSSADKDVDNAKEEAYITSKRINDRFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSAKMDEALEIASDSPRISALVVSEFIGCTPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHHRNCCWGIGFGLNFRILSLSPSFRRLSIDQIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKSSLSEWFDQCEDLGIAAEHGYFIRWGKHASWEMSHADTDFAWKRIAEPVMRSYMEATDGSSVESKESALVWHYCDADPDFGSWQAMELMDHLENVLANEPVVVKKGQHIIEVKPQVILISSHLKLLFFSKSDID* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03024 742 NCBIfam trehalose-phosphatase 561 723 IPR003337 GO:0003824|GO:0005992
Phac9g03024 742 SUPERFAMILY HAD-like 561 723 IPR036412 -
Phac9g03024 742 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 560 677 - -
Phac9g03024 742 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 30 513 - -
Phac9g03024 742 Pfam Trehalose-phosphatase 564 724 IPR003337 GO:0003824|GO:0005992
Phac9g03024 742 CDD GT20_TPS 30 513 IPR001830 GO:0003824|GO:0005992
Phac9g03024 742 Gene3D Glycogen Phosphorylase B; 282 498 - -
Phac9g03024 742 FunFam Alpha,alpha-trehalose-phosphate synthase 283 498 - -
Phac9g03024 742 Pfam Glycosyltransferase family 20 30 513 IPR001830 GO:0003824|GO:0005992
Phac9g03024 742 Gene3D - 563 642 IPR023214 -
Phac9g03024 742 Gene3D - 643 723 - -
Phac9g03024 742 Gene3D Glycogen Phosphorylase B; 22 281 - -
Phac9g03024 742 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g03024 742 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 23 281 - -
Phac9g03024 742 FunFam Trehalose-6-phosphate synthase 2 644 723 - -
Phac9g03024 742 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 20 724 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03024 Phac-Chr9 29250379 29256342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03024 1 725 Trehalose Biosynthesis Gene Families AT1G23870 66.942 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03024 K16055 - gmx:100812031 1398.65