Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03006 ATGGTGGCAAGGTCATGCTTGAATTTGTTAGACTTGGTATCAGGAGATATGCTGAATTTCTCTCGAACTCCCAGATCTCTTCCGCGAGTTATGACTGATCCGGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCGTCTGAACACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCGAAAAGGGACAAAGTATCTGGCAGATGGTGCTTCAGTTATGATGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTCCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGATCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTGATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCGACTTTTCTGCGTAAGCGTTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTCTGGACGGACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGCCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCAAACAAAGTCAGAGAAATCCACGAACAATTTAAGGGCAAAAAGATTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTCATGGCCATAGAACAACTCCTGCAGCAATATCCGGAAATGCAAGGTGAAATAGTACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGACGTTGACAATGCAAAGGAGGAGGCTTACATTACTTCCAAAAGGATAAATGACAGGTTTGGTTTAGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTGCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGTGACGGTTTAAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTGCTAAAATGGATGAAGCCTTAGAAATTGCTTCTGACTCCCCCCGTATAAGTGCACTTGTTGTTTCTGAGTTTATAGGCTGCACACCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCAGTAGCCGAAGCACTAAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCACTACAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAGAAGCTTTGAGCAAGATTTAGTGTTTTCGTGCAAGGATCACCATAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCCCTTTCTCCTAGTTTCAGGAGGCTATCCATAGACCAAATTGTCCCAGCATATAAAAGGAGCAGTTGCAGAGCAATCTTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTGAAAGCCCCCAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAAGTTCATTGAGTGAATGGTTTGATCAGTGTGAGGATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAGCATGCTAGTTGGGAAATGAGTCATGCAGATACGGATTTTGCATGGAAAAGGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCCTCTGTAGAGAGCAAAGAGAGTGCCTTGGTATGGCATTACTGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGATGGATCACCTTGAAAATGTACTTGCGAATGAGCCTGTTGTTGTGAAAAAAGGACAACATATTATCGAAGTCAAGCCTCAGGTCATACTTATCTCTTCTCACCTCAAGTTATTATTTTTCTCAAAATCTGATATTGACTAA 2319 0.4161 MVARSCLNLLDLVSGDMLNFSRTPRSLPRVMTDPVIISHGDGKQSNDDDSGVFSSEHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPPELYKQFHDGFCKQHLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHEQFKGKKIILGVDDMDIFKGVSLKFMAIEQLLQQYPEMQGEIVLIQILNPPSSADKDVDNAKEEAYITSKRINDRFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSAKMDEALEIASDSPRISALVVSEFIGCTPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHHRNCCWGIGFGLNFRILSLSPSFRRLSIDQIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKSSLSEWFDQCEDLGIAAEHGYFIRWGKHASWEMSHADTDFAWKRIAEPVMRSYMEATDGSSVESKESALVWHYCDADPDFGSWQAMELMDHLENVLANEPVVVKKGQHIIEVKPQVILISSHLKLLFFSKSDID* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03006 772 Gene3D - 673 753 - -
Phac9g03006 772 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Phac9g03006 772 Gene3D Glycogen Phosphorylase B; 52 311 - -
Phac9g03006 772 Pfam Trehalose-phosphatase 594 754 IPR003337 GO:0003824|GO:0005992
Phac9g03006 772 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Phac9g03006 772 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Phac9g03006 772 Gene3D - 593 672 IPR023214 -
Phac9g03006 772 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 543 - -
Phac9g03006 772 Gene3D Glycogen Phosphorylase B; 312 528 - -
Phac9g03006 772 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Phac9g03006 772 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Phac9g03006 772 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Phac9g03006 772 SUPERFAMILY HAD-like 591 753 IPR036412 -
Phac9g03006 772 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 754 IPR001830 GO:0003824|GO:0005992
Phac9g03006 772 NCBIfam trehalose-phosphatase 591 753 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03006 Phac-Chr9 29250379 29256342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03006 1 755 Trehalose Biosynthesis Gene Families AT1G23870 66.799 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03006 K16055 - gmx:100812031 1452.96